Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Rnf44Q3UHJ8 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf44Q3UHJ8 Gm16202-201ENSMUST00000117532 544 ntBASIC12.71□□□□□ -0.37
Rnf44Q3UHJ8 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.71□□□□□ -0.37
Rnf44Q3UHJ8 Gm17150-201ENSMUST00000165577 381 ntBASIC12.71□□□□□ -0.37
Rnf44Q3UHJ8 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Rnf44Q3UHJ8 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.71□□□□□ -0.37
Rnf44Q3UHJ8 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Rnf44Q3UHJ8 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.71□□□□□ -0.37
Rnf44Q3UHJ8 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf44Q3UHJ8 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.71□□□□□ -0.37
Rnf44Q3UHJ8 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf44Q3UHJ8 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf44Q3UHJ8 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.71□□□□□ -0.37
Rnf44Q3UHJ8 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf44Q3UHJ8 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf44Q3UHJ8 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf44Q3UHJ8 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf44Q3UHJ8 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf44Q3UHJ8 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf44Q3UHJ8 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.38
Rnf44Q3UHJ8 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.71□□□□□ -0.38
Rnf44Q3UHJ8 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.71□□□□□ -0.38
Rnf44Q3UHJ8 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf44Q3UHJ8 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf44Q3UHJ8 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf44Q3UHJ8 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Gm11618-201ENSMUST00000117946 267 ntBASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Gm11978-201ENSMUST00000122315 466 ntBASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Gm7561-201ENSMUST00000211203 886 ntBASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf44Q3UHJ8 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Gm27847-201ENSMUST00000183711 107 ntBASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Gm27375-201ENSMUST00000183799 107 ntBASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms