Protein–RNA interactions for Protein: Q3UHC2

Lrrk1, Leucine-rich repeat serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 2,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk1Q3UHC2 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 Gm1335-201ENSMUST00000121653 386 ntBASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 Gm26083-201ENSMUST00000157904 193 ntBASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 Gm43822-201ENSMUST00000200285 476 ntBASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrk1Q3UHC2 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrk1Q3UHC2 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrk1Q3UHC2 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrk1Q3UHC2 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrk1Q3UHC2 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
Lrrk1Q3UHC2 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lrrk1Q3UHC2 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrk1Q3UHC2 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrk1Q3UHC2 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrk1Q3UHC2 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Lrrk1Q3UHC2 Gm12384-201ENSMUST00000119228 919 ntBASIC12.12□□□□□ -0.47
Lrrk1Q3UHC2 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.12□□□□□ -0.47
Lrrk1Q3UHC2 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.12□□□□□ -0.47
Lrrk1Q3UHC2 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.12□□□□□ -0.47
Lrrk1Q3UHC2 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Lrrk1Q3UHC2 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.12□□□□□ -0.47
Lrrk1Q3UHC2 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.12□□□□□ -0.47
Lrrk1Q3UHC2 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrk1Q3UHC2 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrk1Q3UHC2 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrk1Q3UHC2 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrk1Q3UHC2 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrk1Q3UHC2 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.12□□□□□ -0.47
Lrrk1Q3UHC2 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lrrk1Q3UHC2 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrk1Q3UHC2 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrk1Q3UHC2 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrk1Q3UHC2 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrk1Q3UHC2 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.12□□□□□ -0.47
Lrrk1Q3UHC2 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrk1Q3UHC2 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Gm8805-201ENSMUST00000117848 313 ntBASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Gm26461-201ENSMUST00000175064 290 ntBASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Gm38341-201ENSMUST00000195357 515 ntBASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Gm37466-201ENSMUST00000195692 652 ntBASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Gm18056-201ENSMUST00000207670 568 ntBASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Gm18061-201ENSMUST00000208350 562 ntBASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Gm18063-201ENSMUST00000208529 568 ntBASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Gm18052-201ENSMUST00000208750 559 ntBASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Gm45930-201ENSMUST00000221330 292 ntBASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lrrk1Q3UHC2 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms