Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Brf2Q3UAW9 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Mir6392-201ENSMUST00000184924 108 ntBASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Gm6983-201ENSMUST00000214912 628 ntBASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Brf2Q3UAW9 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Gm5866-201ENSMUST00000177881 973 ntBASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Mir7654-201ENSMUST00000185082 70 ntBASIC12.4□□□□□ -0.42
Brf2Q3UAW9 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Gm2423-201ENSMUST00000074863 733 ntBASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Brf2Q3UAW9 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms