Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pfdn6Q03958 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pfdn6Q03958 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Gm15376-201ENSMUST00000122258 783 ntBASIC13.26□□□□□ -0.29
Pfdn6Q03958 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pfdn6Q03958 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Mir7221-201ENSMUST00000184009 72 ntBASIC13.26□□□□□ -0.29
Pfdn6Q03958 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.26□□□□□ -0.29
Pfdn6Q03958 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.26□□□□□ -0.29
Pfdn6Q03958 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Gm18307-201ENSMUST00000206864 949 ntBASIC13.26□□□□□ -0.29
Pfdn6Q03958 Gm45841-201ENSMUST00000207700 164 ntBASIC13.26□□□□□ -0.29
Pfdn6Q03958 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pfdn6Q03958 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pfdn6Q03958 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.25□□□□□ -0.29
Pfdn6Q03958 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.25□□□□□ -0.29
Pfdn6Q03958 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.25□□□□□ -0.29
Pfdn6Q03958 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.25□□□□□ -0.29
Pfdn6Q03958 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.25□□□□□ -0.29
Pfdn6Q03958 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Gm6218-201ENSMUST00000219812 628 ntBASIC13.25□□□□□ -0.29
Pfdn6Q03958 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.25□□□□□ -0.29
Pfdn6Q03958 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pfdn6Q03958 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pfdn6Q03958 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pfdn6Q03958 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Pfdn6Q03958 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pfdn6Q03958 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pfdn6Q03958 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pfdn6Q03958 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pfdn6Q03958 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pfdn6Q03958 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pfdn6Q03958 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pfdn6Q03958 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pfdn6Q03958 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms