Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smn1P97801 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smn1P97801 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smn1P97801 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smn1P97801 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smn1P97801 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Smn1P97801 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smn1P97801 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.28□□□□□ -0.6
Smn1P97801 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smn1P97801 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Smn1P97801 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.28□□□□□ -0.6
Smn1P97801 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smn1P97801 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.28□□□□□ -0.6
Smn1P97801 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smn1P97801 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smn1P97801 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smn1P97801 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smn1P97801 Gm12585-201ENSMUST00000117307 290 ntBASIC11.28□□□□□ -0.6
Smn1P97801 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smn1P97801 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Smn1P97801 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC11.28□□□□□ -0.6
Smn1P97801 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.28□□□□□ -0.6
Smn1P97801 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smn1P97801 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smn1P97801 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC11.28□□□□□ -0.6
Smn1P97801 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smn1P97801 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smn1P97801 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smn1P97801 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smn1P97801 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smn1P97801 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smn1P97801 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.28□□□□□ -0.6
Smn1P97801 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smn1P97801 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smn1P97801 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smn1P97801 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Smn1P97801 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smn1P97801 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smn1P97801 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smn1P97801 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smn1P97801 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smn1P97801 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Smn1P97801 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smn1P97801 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smn1P97801 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Smn1P97801 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Smn1P97801 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.27□□□□□ -0.6
Smn1P97801 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smn1P97801 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smn1P97801 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smn1P97801 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smn1P97801 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smn1P97801 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.27□□□□□ -0.61
Smn1P97801 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smn1P97801 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smn1P97801 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smn1P97801 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smn1P97801 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smn1P97801 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smn1P97801 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smn1P97801 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.27□□□□□ -0.61
Smn1P97801 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Smn1P97801 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smn1P97801 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC11.27□□□□□ -0.61
Smn1P97801 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC11.27□□□□□ -0.61
Smn1P97801 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.27□□□□□ -0.61
Smn1P97801 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smn1P97801 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC11.27□□□□□ -0.61
Smn1P97801 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.27□□□□□ -0.61
Smn1P97801 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smn1P97801 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smn1P97801 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smn1P97801 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Smn1P97801 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Smn1P97801 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smn1P97801 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smn1P97801 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smn1P97801 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.27□□□□□ -0.61
Smn1P97801 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Smn1P97801 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smn1P97801 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smn1P97801 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smn1P97801 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.27□□□□□ -0.61
Smn1P97801 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smn1P97801 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smn1P97801 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.27□□□□□ -0.61
Smn1P97801 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smn1P97801 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smn1P97801 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smn1P97801 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smn1P97801 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smn1P97801 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Smn1P97801 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smn1P97801 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smn1P97801 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.26□□□□□ -0.61
Smn1P97801 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smn1P97801 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Smn1P97801 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smn1P97801 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Smn1P97801 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms