Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx3-2P97503 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx3-2P97503 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.48□□□□□ -0.41
Nkx3-2P97503 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx3-2P97503 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx3-2P97503 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx3-2P97503 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx3-2P97503 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Nkx3-2P97503 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx3-2P97503 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx3-2P97503 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx3-2P97503 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx3-2P97503 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx3-2P97503 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx3-2P97503 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx3-2P97503 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx3-2P97503 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.47□□□□□ -0.41
Nkx3-2P97503 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.47□□□□□ -0.41
Nkx3-2P97503 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.47□□□□□ -0.41
Nkx3-2P97503 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx3-2P97503 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.47□□□□□ -0.41
Nkx3-2P97503 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx3-2P97503 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.47□□□□□ -0.41
Nkx3-2P97503 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Nkx3-2P97503 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.47□□□□□ -0.41
Nkx3-2P97503 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Nkx3-2P97503 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.46□□□□□ -0.41
Nkx3-2P97503 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Nkx3-2P97503 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx3-2P97503 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.46□□□□□ -0.41
Nkx3-2P97503 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx3-2P97503 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Nkx3-2P97503 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx3-2P97503 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx3-2P97503 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx3-2P97503 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx3-2P97503 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx3-2P97503 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx3-2P97503 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx3-2P97503 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx3-2P97503 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.46□□□□□ -0.41
Nkx3-2P97503 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Nkx3-2P97503 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.46□□□□□ -0.41
Nkx3-2P97503 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.46□□□□□ -0.41
Nkx3-2P97503 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx3-2P97503 Gm22331-201ENSMUST00000158066 136 ntBASIC12.46□□□□□ -0.41
Nkx3-2P97503 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx3-2P97503 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.46□□□□□ -0.41
Nkx3-2P97503 Gm37424-201ENSMUST00000191727 561 ntBASIC12.46□□□□□ -0.41
Nkx3-2P97503 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx3-2P97503 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.46□□□□□ -0.41
Nkx3-2P97503 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx3-2P97503 Gm43818-201ENSMUST00000200605 466 ntBASIC12.46□□□□□ -0.41
Nkx3-2P97503 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.46□□□□□ -0.41
Nkx3-2P97503 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.46□□□□□ -0.41
Nkx3-2P97503 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.46□□□□□ -0.41
Nkx3-2P97503 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx3-2P97503 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.46□□□□□ -0.41
Nkx3-2P97503 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx3-2P97503 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.46□□□□□ -0.41
Nkx3-2P97503 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx3-2P97503 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.46□□□□□ -0.41
Nkx3-2P97503 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Nkx3-2P97503 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx3-2P97503 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.46□□□□□ -0.42
Nkx3-2P97503 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx3-2P97503 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms