Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
PrkdcP97313 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC8.69□□□□□ -1.02
PrkdcP97313 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC8.69□□□□□ -1.02
PrkdcP97313 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 Gm11509-201ENSMUST00000117358 325 ntBASIC8.69□□□□□ -1.02
PrkdcP97313 Gm11578-201ENSMUST00000118530 459 ntBASIC8.69□□□□□ -1.02
PrkdcP97313 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC8.69□□□□□ -1.02
PrkdcP97313 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 Gm24248-201ENSMUST00000157321 322 ntBASIC8.69□□□□□ -1.02
PrkdcP97313 Gm9916-201ENSMUST00000192943 1228 ntBASIC8.69□□□□□ -1.02
PrkdcP97313 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
PrkdcP97313 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC8.69□□□□□ -1.02
PrkdcP97313 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
PrkdcP97313 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
PrkdcP97313 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
PrkdcP97313 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 AC171277.1-201ENSMUST00000216902 1441 ntBASIC8.69□□□□□ -1.02
PrkdcP97313 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC8.69□□□□□ -1.02
PrkdcP97313 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
PrkdcP97313 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC8.69□□□□□ -1.02
PrkdcP97313 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC8.69□□□□□ -1.02
PrkdcP97313 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Gm37859-201ENSMUST00000195529 2173 ntBASIC8.68□□□□□ -1.02
PrkdcP97313 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC8.68□□□□□ -1.02
PrkdcP97313 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
PrkdcP97313 Gm25063-201ENSMUST00000104666 94 ntBASIC8.68□□□□□ -1.02
PrkdcP97313 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC8.68□□□□□ -1.02
PrkdcP97313 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC8.68□□□□□ -1.02
PrkdcP97313 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
PrkdcP97313 Gm2965-201ENSMUST00000198365 343 ntBASIC8.68□□□□□ -1.02
PrkdcP97313 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Gm6903-201ENSMUST00000160509 1366 ntBASIC8.68□□□□□ -1.02
PrkdcP97313 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Gm29340-201ENSMUST00000188763 3854 ntBASIC8.68□□□□□ -1.02
PrkdcP97313 Gm28182-201ENSMUST00000188354 2477 ntBASIC8.68□□□□□ -1.02
PrkdcP97313 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC8.68□□□□□ -1.02
PrkdcP97313 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC8.68□□□□□ -1.02
PrkdcP97313 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
PrkdcP97313 Ighv5-11-201ENSMUST00000193354 371 ntBASIC8.68□□□□□ -1.02
PrkdcP97313 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC8.68□□□□□ -1.02
PrkdcP97313 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
PrkdcP97313 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
PrkdcP97313 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
PrkdcP97313 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PrkdcP97313 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PrkdcP97313 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PrkdcP97313 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PrkdcP97313 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PrkdcP97313 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms