Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm8213-201ENSMUST00000118191 441 ntBASIC14.32□□□□□ -0.12
Trim43cP86449 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43cP86449 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43cP86449 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.32□□□□□ -0.12
Trim43cP86449 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.32□□□□□ -0.12
Trim43cP86449 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trim43cP86449 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim43cP86449 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43cP86449 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43cP86449 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43cP86449 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim43cP86449 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43cP86449 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43cP86449 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43cP86449 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trim43cP86449 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trim43cP86449 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43cP86449 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trim43cP86449 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43cP86449 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trim43cP86449 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43cP86449 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43cP86449 Mir686-201ENSMUST00000102174 109 ntBASIC14.31□□□□□ -0.12
Trim43cP86449 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43cP86449 Gm15806-201ENSMUST00000120696 955 ntBASIC14.31□□□□□ -0.12
Trim43cP86449 Mir1894-201ENSMUST00000122802 81 ntBASIC14.31□□□□□ -0.12
Trim43cP86449 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43cP86449 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43cP86449 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43cP86449 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43cP86449 Gm8810-201ENSMUST00000172895 754 ntBASIC14.31□□□□□ -0.12
Trim43cP86449 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43cP86449 Gm27892-201ENSMUST00000185017 106 ntBASIC14.31□□□□□ -0.12
Trim43cP86449 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.31□□□□□ -0.12
Trim43cP86449 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43cP86449 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43cP86449 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43cP86449 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43cP86449 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trim43cP86449 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trim43cP86449 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43cP86449 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.31□□□□□ -0.12
Trim43cP86449 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Trim43cP86449 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43cP86449 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim43cP86449 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43cP86449 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43cP86449 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43cP86449 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43cP86449 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43cP86449 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43cP86449 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43cP86449 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43cP86449 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43cP86449 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43cP86449 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43cP86449 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trim43cP86449 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43cP86449 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim43cP86449 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Trim43cP86449 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43cP86449 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trim43cP86449 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43cP86449 Gm13123-201ENSMUST00000122173 492 ntBASIC14.3□□□□□ -0.12
Trim43cP86449 Gm38671-201ENSMUST00000200573 130 ntBASIC14.3□□□□□ -0.12
Trim43cP86449 Gm7653-201ENSMUST00000214567 508 ntBASIC14.3□□□□□ -0.12
Trim43cP86449 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.3□□□□□ -0.12
Trim43cP86449 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43cP86449 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43cP86449 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim43cP86449 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43cP86449 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43cP86449 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43cP86449 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43cP86449 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43cP86449 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43cP86449 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43cP86449 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43cP86449 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43cP86449 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43cP86449 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43cP86449 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43cP86449 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim43cP86449 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43cP86449 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43cP86449 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43cP86449 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43cP86449 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43cP86449 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43cP86449 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43cP86449 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43cP86449 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43cP86449 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43cP86449 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43cP86449 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43cP86449 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43cP86449 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.29□□□□□ -0.12
Trim43cP86449 Gm9002-201ENSMUST00000178437 499 ntBASIC14.29□□□□□ -0.12
Trim43cP86449 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.29□□□□□ -0.12
Trim43cP86449 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms