Protein–RNA interactions for Protein: P80206

Otx2, Homeobox protein OTX2, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx2P80206 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.18□□□□□ -0.46
Otx2P80206 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Otx2P80206 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Otx2P80206 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Otx2P80206 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Otx2P80206 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Otx2P80206 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Otx2P80206 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Otx2P80206 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Otx2P80206 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Otx2P80206 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Otx2P80206 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Otx2P80206 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.17□□□□□ -0.46
Otx2P80206 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Otx2P80206 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Otx2P80206 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Otx2P80206 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Otx2P80206 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.17□□□□□ -0.46
Otx2P80206 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Otx2P80206 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Otx2P80206 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Otx2P80206 Gm13342-201ENSMUST00000121055 207 ntBASIC12.17□□□□□ -0.46
Otx2P80206 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.17□□□□□ -0.46
Otx2P80206 Gm9368-201ENSMUST00000219348 831 ntBASIC12.17□□□□□ -0.46
Otx2P80206 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.17□□□□□ -0.46
Otx2P80206 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Otx2P80206 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Otx2P80206 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.17□□□□□ -0.46
Otx2P80206 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Otx2P80206 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Otx2P80206 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Otx2P80206 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Otx2P80206 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Otx2P80206 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Otx2P80206 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Otx2P80206 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Otx2P80206 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Otx2P80206 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Otx2P80206 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.17□□□□□ -0.46
Otx2P80206 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Otx2P80206 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Otx2P80206 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Otx2P80206 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Otx2P80206 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Otx2P80206 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Otx2P80206 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Otx2P80206 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Otx2P80206 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Otx2P80206 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Otx2P80206 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Otx2P80206 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Otx2P80206 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Otx2P80206 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Otx2P80206 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Otx2P80206 Gm12241-201ENSMUST00000118330 726 ntBASIC12.16□□□□□ -0.46
Otx2P80206 Gm13350-201ENSMUST00000120519 479 ntBASIC12.16□□□□□ -0.46
Otx2P80206 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.16□□□□□ -0.46
Otx2P80206 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.16□□□□□ -0.46
Otx2P80206 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Otx2P80206 Gm27243-201ENSMUST00000183964 521 ntBASIC12.16□□□□□ -0.46
Otx2P80206 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.16□□□□□ -0.46
Otx2P80206 Gm29396-201ENSMUST00000185659 716 ntBASIC12.16□□□□□ -0.46
Otx2P80206 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.16□□□□□ -0.46
Otx2P80206 Gm28693-202ENSMUST00000190758 331 ntBASIC12.16□□□□□ -0.46
Otx2P80206 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.16□□□□□ -0.46
Otx2P80206 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.16□□□□□ -0.46
Otx2P80206 Olfr284-202ENSMUST00000206647 966 ntBASIC12.16□□□□□ -0.46
Otx2P80206 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.16□□□□□ -0.46
Otx2P80206 Gm9257-201ENSMUST00000221254 232 ntBASIC12.16□□□□□ -0.46
Otx2P80206 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
Otx2P80206 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Otx2P80206 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.16□□□□□ -0.46
Otx2P80206 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Otx2P80206 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Otx2P80206 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Otx2P80206 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Otx2P80206 Acot6-202ENSMUST00000222921 3622 ntBASIC12.16□□□□□ -0.46
Otx2P80206 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Otx2P80206 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Otx2P80206 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Otx2P80206 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Otx2P80206 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.16□□□□□ -0.46
Otx2P80206 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Otx2P80206 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Otx2P80206 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Otx2P80206 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Otx2P80206 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Otx2P80206 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Otx2P80206 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Otx2P80206 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Otx2P80206 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Otx2P80206 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Otx2P80206 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.15□□□□□ -0.46
Otx2P80206 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Otx2P80206 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Otx2P80206 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.15□□□□□ -0.46
Otx2P80206 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Otx2P80206 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Otx2P80206 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Otx2P80206 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms