Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.25□□□□□ -0.13
CiitaP79621 Gm8762-201ENSMUST00000193486 339 ntBASIC14.25□□□□□ -0.13
CiitaP79621 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CiitaP79621 Gm45880-201ENSMUST00000213041 853 ntBASIC14.25□□□□□ -0.13
CiitaP79621 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.25□□□□□ -0.13
CiitaP79621 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
CiitaP79621 Gm9823-201ENSMUST00000051212 327 ntBASIC14.25□□□□□ -0.13
CiitaP79621 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CiitaP79621 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CiitaP79621 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CiitaP79621 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CiitaP79621 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CiitaP79621 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.25□□□□□ -0.13
CiitaP79621 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CiitaP79621 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CiitaP79621 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.24□□□□□ -0.13
CiitaP79621 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CiitaP79621 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.24□□□□□ -0.13
CiitaP79621 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CiitaP79621 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CiitaP79621 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CiitaP79621 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CiitaP79621 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.24□□□□□ -0.13
CiitaP79621 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CiitaP79621 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CiitaP79621 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CiitaP79621 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CiitaP79621 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CiitaP79621 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CiitaP79621 Mir874-201ENSMUST00000104769 76 ntBASIC14.24□□□□□ -0.13
CiitaP79621 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.24□□□□□ -0.13
CiitaP79621 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.24□□□□□ -0.13
CiitaP79621 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CiitaP79621 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CiitaP79621 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.24□□□□□ -0.13
CiitaP79621 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CiitaP79621 Gm6007-201ENSMUST00000208170 823 ntBASIC14.24□□□□□ -0.13
CiitaP79621 Gm32025-201ENSMUST00000217960 307 ntBASIC14.24□□□□□ -0.13
CiitaP79621 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.24□□□□□ -0.13
CiitaP79621 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CiitaP79621 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CiitaP79621 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CiitaP79621 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CiitaP79621 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CiitaP79621 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CiitaP79621 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CiitaP79621 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CiitaP79621 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CiitaP79621 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CiitaP79621 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CiitaP79621 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
CiitaP79621 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CiitaP79621 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CiitaP79621 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.23□□□□□ -0.13
CiitaP79621 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
CiitaP79621 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.23□□□□□ -0.13
CiitaP79621 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CiitaP79621 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CiitaP79621 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CiitaP79621 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CiitaP79621 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CiitaP79621 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CiitaP79621 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CiitaP79621 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.23□□□□□ -0.13
CiitaP79621 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.23□□□□□ -0.13
CiitaP79621 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CiitaP79621 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.23□□□□□ -0.13
CiitaP79621 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CiitaP79621 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CiitaP79621 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.23□□□□□ -0.13
CiitaP79621 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CiitaP79621 Gm22121-201ENSMUST00000175148 54 ntBASIC14.23□□□□□ -0.13
CiitaP79621 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CiitaP79621 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.23□□□□□ -0.13
CiitaP79621 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.23□□□□□ -0.13
CiitaP79621 Gm43133-201ENSMUST00000197472 463 ntBASIC14.23□□□□□ -0.13
CiitaP79621 Gm19931-201ENSMUST00000198920 368 ntBASIC14.23□□□□□ -0.13
CiitaP79621 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.23□□□□□ -0.13
CiitaP79621 Gm6013-201ENSMUST00000212264 699 ntBASIC14.23□□□□□ -0.13
CiitaP79621 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.23□□□□□ -0.13
CiitaP79621 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.23□□□□□ -0.13
CiitaP79621 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CiitaP79621 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CiitaP79621 Gm7399-201ENSMUST00000032395 858 ntBASIC14.23□□□□□ -0.13
CiitaP79621 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CiitaP79621 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CiitaP79621 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.23□□□□□ -0.13
CiitaP79621 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CiitaP79621 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CiitaP79621 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CiitaP79621 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CiitaP79621 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.23□□□□□ -0.13
CiitaP79621 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CiitaP79621 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CiitaP79621 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CiitaP79621 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CiitaP79621 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CiitaP79621 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.23□□□□□ -0.13
CiitaP79621 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CiitaP79621 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms