Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shox2P70390 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shox2P70390 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shox2P70390 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Shox2P70390 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Shox2P70390 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Shox2P70390 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Shox2P70390 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shox2P70390 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Shox2P70390 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Shox2P70390 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Shox2P70390 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shox2P70390 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Shox2P70390 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13□□□□□ -0.33
Shox2P70390 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shox2P70390 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13□□□□□ -0.33
Shox2P70390 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Shox2P70390 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Shox2P70390 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shox2P70390 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13□□□□□ -0.33
Shox2P70390 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13□□□□□ -0.33
Shox2P70390 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Shox2P70390 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13□□□□□ -0.33
Shox2P70390 Gm21470-201ENSMUST00000187680 696 ntBASIC13□□□□□ -0.33
Shox2P70390 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13□□□□□ -0.33
Shox2P70390 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13□□□□□ -0.33
Shox2P70390 Gm44945-201ENSMUST00000206764 1187 ntBASIC13□□□□□ -0.33
Shox2P70390 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shox2P70390 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Shox2P70390 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shox2P70390 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Shox2P70390 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Shox2P70390 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Shox2P70390 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shox2P70390 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Shox2P70390 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13□□□□□ -0.33
Shox2P70390 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shox2P70390 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13□□□□□ -0.33
Shox2P70390 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shox2P70390 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Shox2P70390 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13□□□□□ -0.33
Shox2P70390 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Shox2P70390 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Shox2P70390 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.99□□□□□ -0.33
Shox2P70390 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.99□□□□□ -0.33
Shox2P70390 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Shox2P70390 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Shox2P70390 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.99□□□□□ -0.33
Shox2P70390 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shox2P70390 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shox2P70390 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
Shox2P70390 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.98□□□□□ -0.33
Shox2P70390 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shox2P70390 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shox2P70390 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Shox2P70390 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shox2P70390 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shox2P70390 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shox2P70390 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.98□□□□□ -0.33
Shox2P70390 Gm13015-201ENSMUST00000118674 204 ntBASIC12.98□□□□□ -0.33
Shox2P70390 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.98□□□□□ -0.33
Shox2P70390 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shox2P70390 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.98□□□□□ -0.33
Shox2P70390 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shox2P70390 Gm25948-201ENSMUST00000175334 112 ntBASIC12.98□□□□□ -0.33
Shox2P70390 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shox2P70390 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms