Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cux2P70298 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC21.12■□□□□ 0.97
Cux2P70298 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC21.12■□□□□ 0.97
Cux2P70298 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cux2P70298 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cux2P70298 Gm6771-201ENSMUST00000182716 1001 ntBASIC21.12■□□□□ 0.97
Cux2P70298 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cux2P70298 AC154252.2-201ENSMUST00000223593 767 ntBASIC21.12■□□□□ 0.97
Cux2P70298 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Cux2P70298 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cux2P70298 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cux2P70298 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Cux2P70298 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cux2P70298 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cux2P70298 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cux2P70298 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Cux2P70298 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cux2P70298 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cux2P70298 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cux2P70298 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
Cux2P70298 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC21.11■□□□□ 0.97
Cux2P70298 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC21.11■□□□□ 0.97
Cux2P70298 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC21.11■□□□□ 0.97
Cux2P70298 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cux2P70298 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC21.11■□□□□ 0.97
Cux2P70298 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC21.11■□□□□ 0.97
Cux2P70298 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cux2P70298 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cux2P70298 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cux2P70298 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cux2P70298 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Cux2P70298 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Cux2P70298 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cux2P70298 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cux2P70298 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC21.1■□□□□ 0.97
Cux2P70298 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cux2P70298 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC21.1■□□□□ 0.97
Cux2P70298 Gm11246-201ENSMUST00000120880 345 ntBASIC21.1■□□□□ 0.97
Cux2P70298 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cux2P70298 Mir6998-201ENSMUST00000183343 64 ntBASIC21.1■□□□□ 0.97
Cux2P70298 Mir7677-201ENSMUST00000184226 67 ntBASIC21.1■□□□□ 0.97
Cux2P70298 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC21.1■□□□□ 0.97
Cux2P70298 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC21.1■□□□□ 0.97
Cux2P70298 AC171241.1-201ENSMUST00000228144 1166 ntBASIC21.1■□□□□ 0.97
Cux2P70298 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cux2P70298 Gm9873-201ENSMUST00000063891 1097 ntBASIC21.1■□□□□ 0.97
Cux2P70298 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cux2P70298 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Cux2P70298 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cux2P70298 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cux2P70298 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cux2P70298 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cux2P70298 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Cux2P70298 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC21.09■□□□□ 0.97
Cux2P70298 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cux2P70298 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cux2P70298 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cux2P70298 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cux2P70298 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cux2P70298 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cux2P70298 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cux2P70298 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC21.09■□□□□ 0.97
Cux2P70298 Gm11989-201ENSMUST00000117240 672 ntBASIC21.09■□□□□ 0.97
Cux2P70298 Gm11362-201ENSMUST00000118838 850 ntBASIC21.09■□□□□ 0.97
Cux2P70298 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC21.09■□□□□ 0.97
Cux2P70298 Gm8199-201ENSMUST00000121323 823 ntBASIC21.09■□□□□ 0.97
Cux2P70298 Gm23218-201ENSMUST00000158124 276 ntBASIC21.09■□□□□ 0.97
Cux2P70298 Gm6397-201ENSMUST00000161973 1069 ntBASIC21.09■□□□□ 0.97
Cux2P70298 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cux2P70298 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cux2P70298 Olfr1347-205ENSMUST00000220413 964 ntBASIC21.09■□□□□ 0.97
Cux2P70298 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Cux2P70298 Gm9996-201ENSMUST00000070359 913 ntBASIC21.09■□□□□ 0.97
Cux2P70298 Gm7551-201ENSMUST00000089593 1074 ntBASIC21.09■□□□□ 0.97
Cux2P70298 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cux2P70298 AC130671.2-201ENSMUST00000227224 1621 ntBASIC21.09■□□□□ 0.97
Cux2P70298 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Cux2P70298 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cux2P70298 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cux2P70298 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cux2P70298 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cux2P70298 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cux2P70298 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cux2P70298 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cux2P70298 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cux2P70298 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Cux2P70298 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cux2P70298 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cux2P70298 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC21.08■□□□□ 0.97
Cux2P70298 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cux2P70298 Gm19931-201ENSMUST00000198920 368 ntBASIC21.08■□□□□ 0.97
Cux2P70298 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC21.08■□□□□ 0.97
Cux2P70298 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cux2P70298 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Cux2P70298 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cux2P70298 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
Cux2P70298 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Cux2P70298 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cux2P70298 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cux2P70298 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms