Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb1P63158 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb1P63158 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb1P63158 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb1P63158 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb1P63158 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb1P63158 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb1P63158 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Hmgb1P63158 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb1P63158 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb1P63158 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb1P63158 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb1P63158 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb1P63158 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Hmgb1P63158 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb1P63158 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb1P63158 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Hmgb1P63158 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.53□□□□□ -0.08
Hmgb1P63158 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb1P63158 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.53□□□□□ -0.08
Hmgb1P63158 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb1P63158 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC14.53□□□□□ -0.08
Hmgb1P63158 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.53□□□□□ -0.08
Hmgb1P63158 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb1P63158 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.53□□□□□ -0.08
Hmgb1P63158 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Hmgb1P63158 Gm5035-201ENSMUST00000215581 927 ntBASIC14.53□□□□□ -0.08
Hmgb1P63158 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.53□□□□□ -0.08
Hmgb1P63158 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb1P63158 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.53□□□□□ -0.08
Hmgb1P63158 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb1P63158 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb1P63158 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Hmgb1P63158 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Hmgb1P63158 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb1P63158 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb1P63158 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb1P63158 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb1P63158 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb1P63158 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.53□□□□□ -0.08
Hmgb1P63158 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Hmgb1P63158 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb1P63158 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Hmgb1P63158 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Hmgb1P63158 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Hmgb1P63158 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmgb1P63158 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.52□□□□□ -0.08
Hmgb1P63158 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmgb1P63158 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Hmgb1P63158 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmgb1P63158 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmgb1P63158 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Hmgb1P63158 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.52□□□□□ -0.09
Hmgb1P63158 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.52□□□□□ -0.09
Hmgb1P63158 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hmgb1P63158 Gm5867-201ENSMUST00000063197 592 ntBASIC14.52□□□□□ -0.09
Hmgb1P63158 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hmgb1P63158 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.52□□□□□ -0.09
Hmgb1P63158 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmgb1P63158 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.52□□□□□ -0.09
Hmgb1P63158 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmgb1P63158 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hmgb1P63158 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.52□□□□□ -0.09
Hmgb1P63158 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmgb1P63158 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmgb1P63158 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Hmgb1P63158 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb1P63158 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb1P63158 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb1P63158 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Hmgb1P63158 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb1P63158 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb1P63158 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb1P63158 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb1P63158 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb1P63158 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.51□□□□□ -0.09
Hmgb1P63158 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb1P63158 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb1P63158 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb1P63158 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.51□□□□□ -0.09
Hmgb1P63158 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.51□□□□□ -0.09
Hmgb1P63158 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Hmgb1P63158 Gm29608-201ENSMUST00000190444 463 ntBASIC14.51□□□□□ -0.09
Hmgb1P63158 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb1P63158 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb1P63158 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Hmgb1P63158 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.51□□□□□ -0.09
Hmgb1P63158 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb1P63158 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb1P63158 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb1P63158 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.51□□□□□ -0.09
Hmgb1P63158 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb1P63158 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb1P63158 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb1P63158 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb1P63158 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb1P63158 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb1P63158 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb1P63158 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb1P63158 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms