Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ybx1P62960 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ybx1P62960 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ybx1P62960 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ybx1P62960 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Ybx1P62960 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ybx1P62960 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Ybx1P62960 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ybx1P62960 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.47□□□□□ -0.25
Ybx1P62960 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ybx1P62960 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ybx1P62960 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ybx1P62960 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ybx1P62960 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ybx1P62960 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ybx1P62960 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ybx1P62960 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ybx1P62960 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ybx1P62960 Gm16570-201ENSMUST00000161951 436 ntBASIC13.47□□□□□ -0.25
Ybx1P62960 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.47□□□□□ -0.25
Ybx1P62960 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.47□□□□□ -0.25
Ybx1P62960 Gm21769-201ENSMUST00000211922 111 ntBASIC13.47□□□□□ -0.25
Ybx1P62960 Morn2-202ENSMUST00000227729 656 ntBASIC13.47□□□□□ -0.25
Ybx1P62960 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ybx1P62960 Mir433-201ENSMUST00000093564 124 ntBASIC13.47□□□□□ -0.25
Ybx1P62960 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ybx1P62960 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ybx1P62960 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ybx1P62960 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ybx1P62960 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ybx1P62960 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ybx1P62960 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ybx1P62960 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ybx1P62960 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ybx1P62960 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ybx1P62960 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ybx1P62960 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ybx1P62960 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ybx1P62960 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ybx1P62960 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Ybx1P62960 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ybx1P62960 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Ybx1P62960 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Ybx1P62960 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ybx1P62960 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ybx1P62960 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Ybx1P62960 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ybx1P62960 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ybx1P62960 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ybx1P62960 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ybx1P62960 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Ybx1P62960 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ybx1P62960 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ybx1P62960 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ybx1P62960 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ybx1P62960 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Ybx1P62960 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ybx1P62960 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ybx1P62960 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ybx1P62960 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.46□□□□□ -0.25
Ybx1P62960 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Ybx1P62960 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.46□□□□□ -0.25
Ybx1P62960 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.46□□□□□ -0.25
Ybx1P62960 Gm13316-201ENSMUST00000140537 691 ntBASIC13.46□□□□□ -0.25
Ybx1P62960 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ybx1P62960 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.46□□□□□ -0.25
Ybx1P62960 Gm8738-201ENSMUST00000172606 329 ntBASIC13.46□□□□□ -0.25
Ybx1P62960 Gm20482-202ENSMUST00000174729 825 ntBASIC13.46□□□□□ -0.25
Ybx1P62960 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ybx1P62960 Gm37042-201ENSMUST00000193816 581 ntBASIC13.46□□□□□ -0.25
Ybx1P62960 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC13.46□□□□□ -0.25
Ybx1P62960 Gm18584-201ENSMUST00000203098 964 ntBASIC13.46□□□□□ -0.25
Ybx1P62960 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.46□□□□□ -0.25
Ybx1P62960 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Ybx1P62960 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ybx1P62960 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ybx1P62960 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.46□□□□□ -0.25
Ybx1P62960 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ybx1P62960 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ybx1P62960 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ybx1P62960 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.46□□□□□ -0.26
Ybx1P62960 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ybx1P62960 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.46□□□□□ -0.26
Ybx1P62960 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Ybx1P62960 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.46□□□□□ -0.26
Ybx1P62960 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ybx1P62960 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ybx1P62960 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ybx1P62960 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Ybx1P62960 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ybx1P62960 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ybx1P62960 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ybx1P62960 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ybx1P62960 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ybx1P62960 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ybx1P62960 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ybx1P62960 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ybx1P62960 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.45□□□□□ -0.26
Ybx1P62960 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ybx1P62960 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms