Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Lsm5P62322 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.95□□□□□ -0.66
Lsm5P62322 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Lsm5P62322 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Lsm5P62322 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Lsm5P62322 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm5P62322 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm5P62322 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm5P62322 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Lsm5P62322 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm5P62322 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm5P62322 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm5P62322 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm5P62322 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm5P62322 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm5P62322 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm5P62322 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Lsm5P62322 Gm13884-201ENSMUST00000118103 829 ntBASIC10.94□□□□□ -0.66
Lsm5P62322 Gm1401-201ENSMUST00000122048 772 ntBASIC10.94□□□□□ -0.66
Lsm5P62322 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC10.94□□□□□ -0.66
Lsm5P62322 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC10.94□□□□□ -0.66
Lsm5P62322 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm5P62322 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC10.94□□□□□ -0.66
Lsm5P62322 AC154222.1-201ENSMUST00000223882 475 ntBASIC10.94□□□□□ -0.66
Lsm5P62322 AC159295.1-201ENSMUST00000225326 940 ntBASIC10.94□□□□□ -0.66
Lsm5P62322 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.94□□□□□ -0.66
Lsm5P62322 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm5P62322 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm5P62322 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm5P62322 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm5P62322 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Lsm5P62322 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm5P62322 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm5P62322 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm5P62322 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.94□□□□□ -0.66
Lsm5P62322 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Lsm5P62322 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm5P62322 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm5P62322 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Lsm5P62322 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm5P62322 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm5P62322 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm5P62322 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm5P62322 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm5P62322 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm5P62322 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.93□□□□□ -0.66
Lsm5P62322 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Lsm5P62322 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.93□□□□□ -0.66
Lsm5P62322 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.93□□□□□ -0.66
Lsm5P62322 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Lsm5P62322 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Lsm5P62322 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC10.93□□□□□ -0.66
Lsm5P62322 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC10.93□□□□□ -0.66
Lsm5P62322 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC10.93□□□□□ -0.66
Lsm5P62322 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC10.93□□□□□ -0.66
Lsm5P62322 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Lsm5P62322 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Lsm5P62322 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC10.93□□□□□ -0.66
Lsm5P62322 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Lsm5P62322 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.93□□□□□ -0.66
Lsm5P62322 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms