Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm6P62313 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.58□□□□□ -0.56
Lsm6P62313 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm6P62313 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.58□□□□□ -0.56
Lsm6P62313 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm6P62313 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm6P62313 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm6P62313 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm6P62313 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm6P62313 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Lsm6P62313 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Lsm6P62313 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm6P62313 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.58□□□□□ -0.56
Lsm6P62313 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm6P62313 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm6P62313 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm6P62313 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm6P62313 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm6P62313 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm6P62313 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm6P62313 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm6P62313 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm6P62313 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm6P62313 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm6P62313 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm6P62313 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Lsm6P62313 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm6P62313 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm6P62313 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.57□□□□□ -0.56
Lsm6P62313 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm6P62313 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm6P62313 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Lsm6P62313 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Lsm6P62313 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm6P62313 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.57□□□□□ -0.56
Lsm6P62313 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.57□□□□□ -0.56
Lsm6P62313 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.57□□□□□ -0.56
Lsm6P62313 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm6P62313 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.57□□□□□ -0.56
Lsm6P62313 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.57□□□□□ -0.56
Lsm6P62313 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.57□□□□□ -0.56
Lsm6P62313 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm6P62313 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.57□□□□□ -0.56
Lsm6P62313 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.57□□□□□ -0.56
Lsm6P62313 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.57□□□□□ -0.56
Lsm6P62313 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm6P62313 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm6P62313 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm6P62313 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Lsm6P62313 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Lsm6P62313 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.57□□□□□ -0.56
Lsm6P62313 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm6P62313 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm6P62313 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm6P62313 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm6P62313 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm6P62313 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Lsm6P62313 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm6P62313 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm6P62313 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Lsm6P62313 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.57□□□□□ -0.56
Lsm6P62313 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm6P62313 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Lsm6P62313 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm6P62313 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Lsm6P62313 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm6P62313 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Lsm6P62313 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm6P62313 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Lsm6P62313 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm6P62313 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm6P62313 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm6P62313 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm6P62313 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm6P62313 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm6P62313 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm6P62313 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm6P62313 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.56□□□□□ -0.56
Lsm6P62313 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm6P62313 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm6P62313 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Lsm6P62313 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Lsm6P62313 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.56□□□□□ -0.56
Lsm6P62313 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Lsm6P62313 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm6P62313 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.56□□□□□ -0.56
Lsm6P62313 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm6P62313 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.56□□□□□ -0.56
Lsm6P62313 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Lsm6P62313 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm6P62313 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm6P62313 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm6P62313 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm6P62313 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm6P62313 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm6P62313 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Lsm6P62313 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm6P62313 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm6P62313 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Lsm6P62313 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms