Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm3P62311 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Lsm3P62311 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm3P62311 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.98□□□□□ -0.49
Lsm3P62311 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Lsm3P62311 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm3P62311 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Lsm3P62311 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm3P62311 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm3P62311 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm3P62311 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.98□□□□□ -0.49
Lsm3P62311 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm3P62311 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.98□□□□□ -0.49
Lsm3P62311 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.98□□□□□ -0.49
Lsm3P62311 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.98□□□□□ -0.49
Lsm3P62311 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm3P62311 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm3P62311 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Lsm3P62311 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Lsm3P62311 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm3P62311 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm3P62311 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.97□□□□□ -0.49
Lsm3P62311 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm3P62311 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Lsm3P62311 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm3P62311 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm3P62311 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Lsm3P62311 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Lsm3P62311 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Lsm3P62311 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm3P62311 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm3P62311 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Lsm3P62311 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Lsm3P62311 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Lsm3P62311 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC11.97□□□□□ -0.49
Lsm3P62311 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm3P62311 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.97□□□□□ -0.49
Lsm3P62311 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm3P62311 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Lsm3P62311 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm3P62311 Rps4l-201ENSMUST00000071745 943 ntBASIC11.97□□□□□ -0.49
Lsm3P62311 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Lsm3P62311 Gm15590-201ENSMUST00000078419 552 ntBASIC11.97□□□□□ -0.49
Lsm3P62311 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm3P62311 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm3P62311 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm3P62311 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm3P62311 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm3P62311 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm3P62311 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm3P62311 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm3P62311 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm3P62311 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.97□□□□□ -0.49
Lsm3P62311 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm3P62311 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm3P62311 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm3P62311 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.97□□□□□ -0.49
Lsm3P62311 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Lsm3P62311 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm3P62311 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Lsm3P62311 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm3P62311 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm3P62311 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm3P62311 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.97□□□□□ -0.49
Lsm3P62311 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm3P62311 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.96□□□□□ -0.49
Lsm3P62311 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm3P62311 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Lsm3P62311 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm3P62311 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm3P62311 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm3P62311 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm3P62311 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm3P62311 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm3P62311 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm3P62311 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm3P62311 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm3P62311 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.96□□□□□ -0.49
Lsm3P62311 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Lsm3P62311 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm3P62311 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm3P62311 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
Lsm3P62311 Gm27628-201ENSMUST00000184911 107 ntBASIC11.96□□□□□ -0.49
Lsm3P62311 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.96□□□□□ -0.49
Lsm3P62311 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm3P62311 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC11.96□□□□□ -0.49
Lsm3P62311 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC11.96□□□□□ -0.49
Lsm3P62311 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm3P62311 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm3P62311 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm3P62311 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm3P62311 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm3P62311 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm3P62311 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm3P62311 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm3P62311 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm3P62311 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm3P62311 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm3P62311 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms