Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sssca1P56873 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Sssca1P56873 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sssca1P56873 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sssca1P56873 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sssca1P56873 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sssca1P56873 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sssca1P56873 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Sssca1P56873 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sssca1P56873 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Sssca1P56873 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sssca1P56873 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Sssca1P56873 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.65□□□□□ -0.7
Sssca1P56873 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sssca1P56873 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC10.65□□□□□ -0.7
Sssca1P56873 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC10.65□□□□□ -0.7
Sssca1P56873 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Sssca1P56873 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC10.65□□□□□ -0.7
Sssca1P56873 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Sssca1P56873 Gm24513-201ENSMUST00000174964 138 ntBASIC10.65□□□□□ -0.7
Sssca1P56873 CT943659.1-201ENSMUST00000215459 326 ntBASIC10.65□□□□□ -0.7
Sssca1P56873 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sssca1P56873 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sssca1P56873 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sssca1P56873 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sssca1P56873 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sssca1P56873 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Sssca1P56873 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Sssca1P56873 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sssca1P56873 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sssca1P56873 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sssca1P56873 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sssca1P56873 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sssca1P56873 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sssca1P56873 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sssca1P56873 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Sssca1P56873 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Sssca1P56873 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Sssca1P56873 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Sssca1P56873 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Sssca1P56873 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Sssca1P56873 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Sssca1P56873 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Sssca1P56873 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Sssca1P56873 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC10.65□□□□□ -0.71
Sssca1P56873 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Sssca1P56873 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Sssca1P56873 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sssca1P56873 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Sssca1P56873 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Sssca1P56873 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Sssca1P56873 Gm37015-201ENSMUST00000192763 1521 ntBASIC10.64□□□□□ -0.71
Sssca1P56873 AC161252.3-201ENSMUST00000225465 1549 ntBASIC10.64□□□□□ -0.71
Sssca1P56873 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sssca1P56873 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sssca1P56873 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sssca1P56873 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sssca1P56873 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sssca1P56873 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sssca1P56873 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sssca1P56873 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sssca1P56873 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sssca1P56873 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Sssca1P56873 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.64□□□□□ -0.71
Sssca1P56873 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC10.64□□□□□ -0.71
Sssca1P56873 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC10.64□□□□□ -0.71
Sssca1P56873 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sssca1P56873 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sssca1P56873 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC10.64□□□□□ -0.71
Sssca1P56873 Gm27397-201ENSMUST00000184997 107 ntBASIC10.64□□□□□ -0.71
Sssca1P56873 Gm5312-201ENSMUST00000203728 547 ntBASIC10.64□□□□□ -0.71
Sssca1P56873 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.64□□□□□ -0.71
Sssca1P56873 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Sssca1P56873 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sssca1P56873 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sssca1P56873 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sssca1P56873 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sssca1P56873 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sssca1P56873 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sssca1P56873 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sssca1P56873 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Sssca1P56873 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sssca1P56873 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sssca1P56873 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Sssca1P56873 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.64□□□□□ -0.71
Sssca1P56873 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sssca1P56873 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sssca1P56873 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC10.64□□□□□ -0.71
Sssca1P56873 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sssca1P56873 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sssca1P56873 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sssca1P56873 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sssca1P56873 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sssca1P56873 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Sssca1P56873 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sssca1P56873 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Sssca1P56873 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Sssca1P56873 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sssca1P56873 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.63□□□□□ -0.71
Sssca1P56873 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms