Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Msh6P54276 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Msh6P54276 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Msh6P54276 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC16.58■□□□□ 0.24
Msh6P54276 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Msh6P54276 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msh6P54276 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msh6P54276 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msh6P54276 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Msh6P54276 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Msh6P54276 Gm23270-201ENSMUST00000104055 131 ntBASIC16.57■□□□□ 0.24
Msh6P54276 Gm7857-201ENSMUST00000117957 358 ntBASIC16.57■□□□□ 0.24
Msh6P54276 B9d1os-201ENSMUST00000137010 674 ntBASIC16.57■□□□□ 0.24
Msh6P54276 Gm13570-201ENSMUST00000140763 309 ntBASIC16.57■□□□□ 0.24
Msh6P54276 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Msh6P54276 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Msh6P54276 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Msh6P54276 Gm18212-201ENSMUST00000211678 889 ntBASIC16.57■□□□□ 0.24
Msh6P54276 Abhd11os-203ENSMUST00000222613 363 ntBASIC16.57■□□□□ 0.24
Msh6P54276 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msh6P54276 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msh6P54276 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msh6P54276 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msh6P54276 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.57■□□□□ 0.24
Msh6P54276 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msh6P54276 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msh6P54276 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msh6P54276 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Msh6P54276 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msh6P54276 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msh6P54276 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Msh6P54276 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Msh6P54276 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msh6P54276 AC167669.2-201ENSMUST00000224417 1620 ntBASIC16.57■□□□□ 0.24
Msh6P54276 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msh6P54276 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Msh6P54276 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msh6P54276 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.56■□□□□ 0.24
Msh6P54276 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Msh6P54276 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh6P54276 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh6P54276 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Msh6P54276 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh6P54276 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Msh6P54276 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh6P54276 Gm11531-201ENSMUST00000117614 555 ntBASIC16.56■□□□□ 0.24
Msh6P54276 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
Msh6P54276 Gm17208-201ENSMUST00000168388 535 ntBASIC16.56■□□□□ 0.24
Msh6P54276 Gm26956-201ENSMUST00000182176 986 ntBASIC16.56■□□□□ 0.24
Msh6P54276 Gm9061-201ENSMUST00000182707 1006 ntBASIC16.56■□□□□ 0.24
Msh6P54276 Gm9004-201ENSMUST00000218739 1222 ntBASIC16.56■□□□□ 0.24
Msh6P54276 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh6P54276 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh6P54276 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh6P54276 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Msh6P54276 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh6P54276 Gm9025-201ENSMUST00000122415 1575 ntBASIC16.56■□□□□ 0.24
Msh6P54276 AC113060.1-201ENSMUST00000225689 1573 ntBASIC16.56■□□□□ 0.24
Msh6P54276 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Msh6P54276 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC16.56■□□□□ 0.24
Msh6P54276 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Msh6P54276 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh6P54276 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Msh6P54276 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Msh6P54276 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh6P54276 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Msh6P54276 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh6P54276 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh6P54276 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh6P54276 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC16.55■□□□□ 0.24
Msh6P54276 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC16.55■□□□□ 0.24
Msh6P54276 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Msh6P54276 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh6P54276 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Msh6P54276 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC16.55■□□□□ 0.24
Msh6P54276 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC16.55■□□□□ 0.24
Msh6P54276 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Msh6P54276 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Msh6P54276 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh6P54276 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh6P54276 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh6P54276 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC16.55■□□□□ 0.24
Msh6P54276 Gm19931-201ENSMUST00000198920 368 ntBASIC16.55■□□□□ 0.24
Msh6P54276 Gm44967-201ENSMUST00000207047 631 ntBASIC16.55■□□□□ 0.24
Msh6P54276 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh6P54276 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh6P54276 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh6P54276 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh6P54276 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh6P54276 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh6P54276 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh6P54276 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh6P54276 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC16.55■□□□□ 0.24
Msh6P54276 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh6P54276 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh6P54276 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh6P54276 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Msh6P54276 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Msh6P54276 Matn2-206ENSMUST00000228570 2798 ntBASIC16.54■□□□□ 0.24
Msh6P54276 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms