Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Fdft1P53798 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Fdft1P53798 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Gm5354-201ENSMUST00000182417 973 ntBASIC13.18□□□□□ -0.3
Fdft1P53798 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.18□□□□□ -0.3
Fdft1P53798 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.18□□□□□ -0.3
Fdft1P53798 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.18□□□□□ -0.3
Fdft1P53798 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.18□□□□□ -0.3
Fdft1P53798 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.18□□□□□ -0.3
Fdft1P53798 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Fdft1P53798 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fdft1P53798 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fdft1P53798 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.17□□□□□ -0.3
Fdft1P53798 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Fdft1P53798 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fdft1P53798 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Fdft1P53798 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Fdft1P53798 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fdft1P53798 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fdft1P53798 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Fdft1P53798 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fdft1P53798 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.17□□□□□ -0.3
Fdft1P53798 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Fdft1P53798 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Fdft1P53798 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fdft1P53798 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.17□□□□□ -0.3
Fdft1P53798 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fdft1P53798 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fdft1P53798 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fdft1P53798 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Fdft1P53798 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fdft1P53798 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Fdft1P53798 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.17□□□□□ -0.3
Fdft1P53798 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Fdft1P53798 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.17□□□□□ -0.3
Fdft1P53798 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fdft1P53798 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fdft1P53798 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fdft1P53798 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fdft1P53798 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.17□□□□□ -0.3
Fdft1P53798 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fdft1P53798 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fdft1P53798 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fdft1P53798 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fdft1P53798 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fdft1P53798 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Fdft1P53798 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fdft1P53798 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fdft1P53798 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.16□□□□□ -0.3
Fdft1P53798 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fdft1P53798 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fdft1P53798 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fdft1P53798 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fdft1P53798 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fdft1P53798 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fdft1P53798 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Fdft1P53798 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Fdft1P53798 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fdft1P53798 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Fdft1P53798 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.16□□□□□ -0.3
Fdft1P53798 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Fdft1P53798 Mir6977-201ENSMUST00000184960 64 ntBASIC13.16□□□□□ -0.3
Fdft1P53798 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.16□□□□□ -0.3
Fdft1P53798 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fdft1P53798 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fdft1P53798 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fdft1P53798 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fdft1P53798 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fdft1P53798 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
Fdft1P53798 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.16□□□□□ -0.3
Fdft1P53798 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Fdft1P53798 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fdft1P53798 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fdft1P53798 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Fdft1P53798 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fdft1P53798 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Fdft1P53798 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms