Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.23□□□□□ -0.13
SqleP52019 Gm7600-201ENSMUST00000209657 785 ntBASIC14.23□□□□□ -0.13
SqleP52019 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.23□□□□□ -0.13
SqleP52019 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.23□□□□□ -0.13
SqleP52019 AC135469.1-201ENSMUST00000225984 772 ntBASIC14.23□□□□□ -0.13
SqleP52019 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SqleP52019 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SqleP52019 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SqleP52019 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SqleP52019 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SqleP52019 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SqleP52019 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SqleP52019 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SqleP52019 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SqleP52019 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SqleP52019 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.23□□□□□ -0.13
SqleP52019 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SqleP52019 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.23□□□□□ -0.13
SqleP52019 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SqleP52019 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SqleP52019 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
SqleP52019 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SqleP52019 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SqleP52019 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SqleP52019 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SqleP52019 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SqleP52019 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SqleP52019 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SqleP52019 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SqleP52019 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SqleP52019 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC14.22□□□□□ -0.13
SqleP52019 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SqleP52019 Gm6407-201ENSMUST00000176468 549 ntBASIC14.22□□□□□ -0.13
SqleP52019 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SqleP52019 Gm8285-201ENSMUST00000208293 759 ntBASIC14.22□□□□□ -0.13
SqleP52019 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.22□□□□□ -0.13
SqleP52019 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC14.22□□□□□ -0.13
SqleP52019 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SqleP52019 Gzmn-202ENSMUST00000225535 989 ntBASIC14.22□□□□□ -0.13
SqleP52019 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SqleP52019 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SqleP52019 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SqleP52019 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SqleP52019 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SqleP52019 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SqleP52019 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.22□□□□□ -0.13
SqleP52019 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SqleP52019 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SqleP52019 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SqleP52019 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.22□□□□□ -0.13
SqleP52019 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SqleP52019 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SqleP52019 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SqleP52019 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SqleP52019 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SqleP52019 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SqleP52019 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SqleP52019 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SqleP52019 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SqleP52019 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SqleP52019 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.21□□□□□ -0.13
SqleP52019 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SqleP52019 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SqleP52019 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SqleP52019 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.21□□□□□ -0.13
SqleP52019 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.21□□□□□ -0.13
SqleP52019 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SqleP52019 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC14.21□□□□□ -0.13
SqleP52019 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC14.21□□□□□ -0.13
SqleP52019 Gm9555-201ENSMUST00000200908 583 ntBASIC14.21□□□□□ -0.13
SqleP52019 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.21□□□□□ -0.13
SqleP52019 CT025551.1-201ENSMUST00000223996 692 ntBASIC14.21□□□□□ -0.13
SqleP52019 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SqleP52019 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SqleP52019 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC14.21□□□□□ -0.13
SqleP52019 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
SqleP52019 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
SqleP52019 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
SqleP52019 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SqleP52019 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.21□□□□□ -0.14
SqleP52019 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SqleP52019 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SqleP52019 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SqleP52019 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SqleP52019 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SqleP52019 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.2□□□□□ -0.14
SqleP52019 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SqleP52019 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SqleP52019 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SqleP52019 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.2□□□□□ -0.14
SqleP52019 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.2□□□□□ -0.14
SqleP52019 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.2□□□□□ -0.14
SqleP52019 Gm44999-201ENSMUST00000207456 1493 ntBASIC14.2□□□□□ -0.14
SqleP52019 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SqleP52019 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SqleP52019 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SqleP52019 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SqleP52019 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SqleP52019 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SqleP52019 Gm13888-201ENSMUST00000119148 422 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms