Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc3P49135 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc3P49135 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc3P49135 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ercc3P49135 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc3P49135 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc3P49135 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc3P49135 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc3P49135 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
Ercc3P49135 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc3P49135 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc3P49135 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc3P49135 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc3P49135 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ercc3P49135 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc3P49135 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc3P49135 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc3P49135 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc3P49135 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc3P49135 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.64■□□□□ 0.09
Ercc3P49135 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc3P49135 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc3P49135 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.64■□□□□ 0.09
Ercc3P49135 Gm13369-201ENSMUST00000119442 987 ntBASIC15.64■□□□□ 0.09
Ercc3P49135 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.64■□□□□ 0.09
Ercc3P49135 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc3P49135 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.64■□□□□ 0.09
Ercc3P49135 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc3P49135 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.64■□□□□ 0.09
Ercc3P49135 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ercc3P49135 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.64■□□□□ 0.09
Ercc3P49135 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.64■□□□□ 0.09
Ercc3P49135 Gm43433-201ENSMUST00000196573 481 ntBASIC15.64■□□□□ 0.09
Ercc3P49135 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.64■□□□□ 0.09
Ercc3P49135 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.64■□□□□ 0.09
Ercc3P49135 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc3P49135 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Ercc3P49135 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Ercc3P49135 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ercc3P49135 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc3P49135 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc3P49135 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.64■□□□□ 0.09
Ercc3P49135 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Ercc3P49135 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc3P49135 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ercc3P49135 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
Ercc3P49135 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc3P49135 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc3P49135 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ercc3P49135 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc3P49135 AC154747.3-201ENSMUST00000224471 3470 ntBASIC15.63■□□□□ 0.09
Ercc3P49135 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc3P49135 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ercc3P49135 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc3P49135 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc3P49135 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ercc3P49135 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc3P49135 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc3P49135 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ercc3P49135 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc3P49135 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.63■□□□□ 0.09
Ercc3P49135 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc3P49135 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ercc3P49135 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Ercc3P49135 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc3P49135 Gm27486-201ENSMUST00000184923 80 ntBASIC15.63■□□□□ 0.09
Ercc3P49135 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc3P49135 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc3P49135 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Ercc3P49135 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.63■□□□□ 0.09
Ercc3P49135 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.63■□□□□ 0.09
Ercc3P49135 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.63■□□□□ 0.09
Ercc3P49135 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc3P49135 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc3P49135 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.63■□□□□ 0.09
Ercc3P49135 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc3P49135 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc3P49135 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ercc3P49135 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc3P49135 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ercc3P49135 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.63■□□□□ 0.09
Ercc3P49135 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc3P49135 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ercc3P49135 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ercc3P49135 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.62■□□□□ 0.09
Ercc3P49135 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.62■□□□□ 0.09
Ercc3P49135 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Ercc3P49135 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.62■□□□□ 0.09
Ercc3P49135 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Ercc3P49135 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ercc3P49135 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ercc3P49135 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.62■□□□□ 0.09
Ercc3P49135 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ercc3P49135 Gm12203-201ENSMUST00000118235 598 ntBASIC15.62■□□□□ 0.09
Ercc3P49135 Gm11425-201ENSMUST00000119608 498 ntBASIC15.62■□□□□ 0.09
Ercc3P49135 Gm12209-201ENSMUST00000120089 596 ntBASIC15.62■□□□□ 0.09
Ercc3P49135 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ercc3P49135 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ercc3P49135 Gm22331-201ENSMUST00000158066 136 ntBASIC15.62■□□□□ 0.09
Ercc3P49135 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms