Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Vps4bP46467 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4bP46467 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.39□□□□□ -0.27
Vps4bP46467 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4bP46467 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.39□□□□□ -0.27
Vps4bP46467 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4bP46467 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4bP46467 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4bP46467 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4bP46467 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.39□□□□□ -0.27
Vps4bP46467 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4bP46467 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Vps4bP46467 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4bP46467 Gm12490-201ENSMUST00000120255 560 ntBASIC13.39□□□□□ -0.27
Vps4bP46467 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4bP46467 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.39□□□□□ -0.27
Vps4bP46467 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.39□□□□□ -0.27
Vps4bP46467 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.39□□□□□ -0.27
Vps4bP46467 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.39□□□□□ -0.27
Vps4bP46467 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.39□□□□□ -0.27
Vps4bP46467 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.39□□□□□ -0.27
Vps4bP46467 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4bP46467 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4bP46467 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4bP46467 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4bP46467 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4bP46467 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4bP46467 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Vps4bP46467 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4bP46467 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4bP46467 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4bP46467 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4bP46467 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4bP46467 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4bP46467 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4bP46467 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Vps4bP46467 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4bP46467 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4bP46467 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4bP46467 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Vps4bP46467 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4bP46467 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.39□□□□□ -0.27
Vps4bP46467 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Vps4bP46467 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4bP46467 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4bP46467 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4bP46467 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4bP46467 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4bP46467 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4bP46467 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
Vps4bP46467 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Vps4bP46467 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4bP46467 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4bP46467 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Vps4bP46467 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.38□□□□□ -0.27
Vps4bP46467 Gm14719-201ENSMUST00000121891 340 ntBASIC13.38□□□□□ -0.27
Vps4bP46467 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.38□□□□□ -0.27
Vps4bP46467 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4bP46467 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4bP46467 Gm28760-201ENSMUST00000185995 736 ntBASIC13.38□□□□□ -0.27
Vps4bP46467 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.38□□□□□ -0.27
Vps4bP46467 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.38□□□□□ -0.27
Vps4bP46467 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Vps4bP46467 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.38□□□□□ -0.27
Vps4bP46467 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.38□□□□□ -0.27
Vps4bP46467 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.38□□□□□ -0.27
Vps4bP46467 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Vps4bP46467 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4bP46467 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4bP46467 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Vps4bP46467 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4bP46467 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4bP46467 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4bP46467 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4bP46467 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4bP46467 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.38□□□□□ -0.27
Vps4bP46467 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4bP46467 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Vps4bP46467 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Vps4bP46467 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.37□□□□□ -0.27
Vps4bP46467 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Vps4bP46467 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms