Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf4P43488 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.73□□□□□ -0.37
Tnfsf4P43488 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf4P43488 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf4P43488 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.73□□□□□ -0.37
Tnfsf4P43488 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.73□□□□□ -0.37
Tnfsf4P43488 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf4P43488 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.73□□□□□ -0.37
Tnfsf4P43488 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf4P43488 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Tnfsf4P43488 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.73□□□□□ -0.37
Tnfsf4P43488 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf4P43488 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf4P43488 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf4P43488 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf4P43488 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Tnfsf4P43488 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Tnfsf4P43488 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Tnfsf4P43488 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf4P43488 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf4P43488 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf4P43488 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Tnfsf4P43488 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Tnfsf4P43488 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf4P43488 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Tnfsf4P43488 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf4P43488 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf4P43488 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Tnfsf4P43488 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf4P43488 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf4P43488 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf4P43488 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf4P43488 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf4P43488 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.72□□□□□ -0.37
Tnfsf4P43488 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Tnfsf4P43488 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf4P43488 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf4P43488 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Tnfsf4P43488 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Tnfsf4P43488 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.72□□□□□ -0.37
Tnfsf4P43488 Gm26464-201ENSMUST00000157094 305 ntBASIC12.72□□□□□ -0.37
Tnfsf4P43488 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.72□□□□□ -0.37
Tnfsf4P43488 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf4P43488 Gm5279-201ENSMUST00000199575 745 ntBASIC12.72□□□□□ -0.37
Tnfsf4P43488 Gm19078-201ENSMUST00000206311 727 ntBASIC12.72□□□□□ -0.37
Tnfsf4P43488 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf4P43488 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf4P43488 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf4P43488 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf4P43488 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf4P43488 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Tnfsf4P43488 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf4P43488 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf4P43488 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf4P43488 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf4P43488 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.72□□□□□ -0.37
Tnfsf4P43488 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf4P43488 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Tnfsf4P43488 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Tnfsf4P43488 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf4P43488 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf4P43488 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf4P43488 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf4P43488 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf4P43488 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf4P43488 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf4P43488 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf4P43488 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Tnfsf4P43488 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf4P43488 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf4P43488 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf4P43488 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf4P43488 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf4P43488 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.71□□□□□ -0.37
Tnfsf4P43488 Gm11524-201ENSMUST00000119349 807 ntBASIC12.71□□□□□ -0.37
Tnfsf4P43488 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.71□□□□□ -0.37
Tnfsf4P43488 Gm15376-201ENSMUST00000122258 783 ntBASIC12.71□□□□□ -0.37
Tnfsf4P43488 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.71□□□□□ -0.37
Tnfsf4P43488 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf4P43488 Gm29608-201ENSMUST00000190444 463 ntBASIC12.71□□□□□ -0.37
Tnfsf4P43488 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf4P43488 Gm20445-201ENSMUST00000061905 565 ntBASIC12.71□□□□□ -0.37
Tnfsf4P43488 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf4P43488 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfsf4P43488 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfsf4P43488 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Tnfsf4P43488 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfsf4P43488 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.71□□□□□ -0.38
Tnfsf4P43488 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.38
Tnfsf4P43488 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Tnfsf4P43488 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfsf4P43488 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Tnfsf4P43488 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.7□□□□□ -0.38
Tnfsf4P43488 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.7□□□□□ -0.38
Tnfsf4P43488 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf4P43488 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms