Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Kdm5cP41230 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Kdm5cP41230 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Kdm5cP41230 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Kdm5cP41230 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Kdm5cP41230 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Kdm5cP41230 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC18.72■□□□□ 0.59
Kdm5cP41230 Gm12029-201ENSMUST00000120073 832 ntBASIC18.72■□□□□ 0.59
Kdm5cP41230 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC18.72■□□□□ 0.59
Kdm5cP41230 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Kdm5cP41230 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC18.72■□□□□ 0.59
Kdm5cP41230 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Kdm5cP41230 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Kdm5cP41230 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Kdm5cP41230 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Kdm5cP41230 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Kdm5cP41230 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Kdm5cP41230 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Kdm5cP41230 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC18.72■□□□□ 0.59
Kdm5cP41230 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Kdm5cP41230 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Kdm5cP41230 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Kdm5cP41230 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Kdm5cP41230 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC18.72■□□□□ 0.59
Kdm5cP41230 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC18.72■□□□□ 0.59
Kdm5cP41230 Mir7686-201ENSMUST00000200604 57 ntBASIC18.72■□□□□ 0.59
Kdm5cP41230 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC18.72■□□□□ 0.59
Kdm5cP41230 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Kdm5cP41230 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Kdm5cP41230 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Kdm5cP41230 Gm12626-201ENSMUST00000117339 1983 ntBASIC18.71■□□□□ 0.59
Kdm5cP41230 Gm12623-201ENSMUST00000119849 1983 ntBASIC18.71■□□□□ 0.59
Kdm5cP41230 AC154725.1-201ENSMUST00000224826 1961 ntBASIC18.71■□□□□ 0.59
Kdm5cP41230 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Kdm5cP41230 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC18.71■□□□□ 0.59
Kdm5cP41230 Gm6580-201ENSMUST00000117504 1357 ntBASIC18.71■□□□□ 0.59
Kdm5cP41230 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Kdm5cP41230 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Kdm5cP41230 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Kdm5cP41230 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Kdm5cP41230 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Kdm5cP41230 Gm44094-201ENSMUST00000204703 2030 ntBASIC18.71■□□□□ 0.59
Kdm5cP41230 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Kdm5cP41230 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Kdm5cP41230 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Kdm5cP41230 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Kdm5cP41230 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Kdm5cP41230 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC18.71■□□□□ 0.59
Kdm5cP41230 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Kdm5cP41230 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Kdm5cP41230 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Kdm5cP41230 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC18.71■□□□□ 0.59
Kdm5cP41230 Gm5732-201ENSMUST00000182596 1007 ntBASIC18.71■□□□□ 0.59
Kdm5cP41230 Gm37905-201ENSMUST00000195310 341 ntBASIC18.71■□□□□ 0.59
Kdm5cP41230 Gm42937-201ENSMUST00000197360 752 ntBASIC18.71■□□□□ 0.59
Kdm5cP41230 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Kdm5cP41230 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Kdm5cP41230 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Kdm5cP41230 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Kdm5cP41230 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Kdm5cP41230 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Kdm5cP41230 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Kdm5cP41230 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Kdm5cP41230 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Kdm5cP41230 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Kdm5cP41230 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Kdm5cP41230 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Kdm5cP41230 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Kdm5cP41230 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Kdm5cP41230 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Kdm5cP41230 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Kdm5cP41230 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Kdm5cP41230 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Kdm5cP41230 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC18.7■□□□□ 0.58
Kdm5cP41230 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC18.7■□□□□ 0.58
Kdm5cP41230 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC18.7■□□□□ 0.58
Kdm5cP41230 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Kdm5cP41230 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC18.7■□□□□ 0.58
Kdm5cP41230 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Kdm5cP41230 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Kdm5cP41230 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Kdm5cP41230 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Kdm5cP41230 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Kdm5cP41230 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Kdm5cP41230 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Kdm5cP41230 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Kdm5cP41230 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Kdm5cP41230 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Kdm5cP41230 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Kdm5cP41230 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Kdm5cP41230 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Kdm5cP41230 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Kdm5cP41230 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Kdm5cP41230 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Kdm5cP41230 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Kdm5cP41230 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC18.69■□□□□ 0.58
Kdm5cP41230 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Kdm5cP41230 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Kdm5cP41230 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC18.69■□□□□ 0.58
Kdm5cP41230 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms