Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VhlP40338 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VhlP40338 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VhlP40338 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
VhlP40338 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VhlP40338 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
VhlP40338 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
VhlP40338 Gm8410-201ENSMUST00000117225 605 ntBASIC10.82□□□□□ -0.68
VhlP40338 Gm15693-201ENSMUST00000120470 637 ntBASIC10.82□□□□□ -0.68
VhlP40338 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Gm26308-201ENSMUST00000157768 69 ntBASIC10.82□□□□□ -0.68
VhlP40338 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC10.82□□□□□ -0.68
VhlP40338 Gm25144-201ENSMUST00000179561 110 ntBASIC10.82□□□□□ -0.68
VhlP40338 Gm25352-201ENSMUST00000179815 110 ntBASIC10.82□□□□□ -0.68
VhlP40338 Gm3436-201ENSMUST00000179930 840 ntBASIC10.82□□□□□ -0.68
VhlP40338 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC10.82□□□□□ -0.68
VhlP40338 Gm27533-201ENSMUST00000183800 152 ntBASIC10.82□□□□□ -0.68
VhlP40338 Gm44335-201ENSMUST00000196879 141 ntBASIC10.82□□□□□ -0.68
VhlP40338 Gm44297-201ENSMUST00000198304 141 ntBASIC10.82□□□□□ -0.68
VhlP40338 Gm44346-201ENSMUST00000198851 141 ntBASIC10.82□□□□□ -0.68
VhlP40338 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
VhlP40338 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Gm37015-201ENSMUST00000192763 1521 ntBASIC10.82□□□□□ -0.68
VhlP40338 AC161252.3-201ENSMUST00000225465 1549 ntBASIC10.82□□□□□ -0.68
VhlP40338 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC10.82□□□□□ -0.68
VhlP40338 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.82□□□□□ -0.68
VhlP40338 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VhlP40338 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VhlP40338 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
VhlP40338 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VhlP40338 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
VhlP40338 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
VhlP40338 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
VhlP40338 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VhlP40338 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
VhlP40338 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
VhlP40338 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.81□□□□□ -0.68
VhlP40338 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
VhlP40338 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VhlP40338 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VhlP40338 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VhlP40338 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
VhlP40338 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VhlP40338 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC10.81□□□□□ -0.68
VhlP40338 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
VhlP40338 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
VhlP40338 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
VhlP40338 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
VhlP40338 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC10.81□□□□□ -0.68
VhlP40338 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
VhlP40338 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VhlP40338 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
VhlP40338 Gm27622-201ENSMUST00000183779 60 ntBASIC10.81□□□□□ -0.68
VhlP40338 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC10.81□□□□□ -0.68
VhlP40338 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VhlP40338 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VhlP40338 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VhlP40338 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC10.81□□□□□ -0.68
VhlP40338 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
VhlP40338 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VhlP40338 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VhlP40338 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VhlP40338 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
VhlP40338 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.81□□□□□ -0.68
VhlP40338 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
VhlP40338 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
VhlP40338 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VhlP40338 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
VhlP40338 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VhlP40338 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms