Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl12P40224 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl12P40224 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cxcl12P40224 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cxcl12P40224 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl12P40224 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl12P40224 Gm18734-201ENSMUST00000172937 808 ntBASIC13.48□□□□□ -0.25
Cxcl12P40224 Gm44126-201ENSMUST00000204831 514 ntBASIC13.48□□□□□ -0.25
Cxcl12P40224 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.48□□□□□ -0.25
Cxcl12P40224 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.48□□□□□ -0.25
Cxcl12P40224 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.48□□□□□ -0.25
Cxcl12P40224 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl12P40224 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl12P40224 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.48□□□□□ -0.25
Cxcl12P40224 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl12P40224 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.48□□□□□ -0.25
Cxcl12P40224 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cxcl12P40224 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl12P40224 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl12P40224 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl12P40224 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl12P40224 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cxcl12P40224 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl12P40224 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cxcl12P40224 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl12P40224 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.48□□□□□ -0.25
Cxcl12P40224 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl12P40224 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cxcl12P40224 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl12P40224 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cxcl12P40224 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cxcl12P40224 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cxcl12P40224 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cxcl12P40224 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cxcl12P40224 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cxcl12P40224 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cxcl12P40224 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cxcl12P40224 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.47□□□□□ -0.25
Cxcl12P40224 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.47□□□□□ -0.25
Cxcl12P40224 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cxcl12P40224 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cxcl12P40224 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cxcl12P40224 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cxcl12P40224 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cxcl12P40224 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cxcl12P40224 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cxcl12P40224 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cxcl12P40224 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.47□□□□□ -0.25
Cxcl12P40224 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cxcl12P40224 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cxcl12P40224 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.47□□□□□ -0.25
Cxcl12P40224 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.47□□□□□ -0.25
Cxcl12P40224 Gm45219-201ENSMUST00000205602 465 ntBASIC13.47□□□□□ -0.25
Cxcl12P40224 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cxcl12P40224 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cxcl12P40224 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cxcl12P40224 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cxcl12P40224 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cxcl12P40224 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cxcl12P40224 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cxcl12P40224 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cxcl12P40224 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cxcl12P40224 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cxcl12P40224 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cxcl12P40224 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cxcl12P40224 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cxcl12P40224 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Cxcl12P40224 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cxcl12P40224 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cxcl12P40224 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cxcl12P40224 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cxcl12P40224 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cxcl12P40224 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cxcl12P40224 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.46□□□□□ -0.25
Cxcl12P40224 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cxcl12P40224 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cxcl12P40224 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cxcl12P40224 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.46□□□□□ -0.25
Cxcl12P40224 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cxcl12P40224 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cxcl12P40224 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cxcl12P40224 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cxcl12P40224 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.46□□□□□ -0.25
Cxcl12P40224 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cxcl12P40224 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.46□□□□□ -0.25
Cxcl12P40224 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cxcl12P40224 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.46□□□□□ -0.25
Cxcl12P40224 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Cxcl12P40224 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.46□□□□□ -0.25
Cxcl12P40224 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.46□□□□□ -0.25
Cxcl12P40224 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cxcl12P40224 Gm8194-201ENSMUST00000159783 859 ntBASIC13.46□□□□□ -0.25
Cxcl12P40224 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.46□□□□□ -0.25
Cxcl12P40224 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cxcl12P40224 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.46□□□□□ -0.25
Cxcl12P40224 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.46□□□□□ -0.25
Cxcl12P40224 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Cxcl12P40224 Gm38092-201ENSMUST00000195600 653 ntBASIC13.46□□□□□ -0.25
Cxcl12P40224 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.46□□□□□ -0.25
Cxcl12P40224 Gm17812-201ENSMUST00000204935 318 ntBASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms