Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.98□□□□□ -0.33
HmgclP38060 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.98□□□□□ -0.33
HmgclP38060 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HmgclP38060 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
HmgclP38060 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
HmgclP38060 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
HmgclP38060 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HmgclP38060 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HmgclP38060 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.98□□□□□ -0.33
HmgclP38060 Gm8213-201ENSMUST00000118191 441 ntBASIC12.98□□□□□ -0.33
HmgclP38060 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HmgclP38060 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.98□□□□□ -0.33
HmgclP38060 Proscos-202ENSMUST00000178990 666 ntBASIC12.98□□□□□ -0.33
HmgclP38060 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.98□□□□□ -0.33
HmgclP38060 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.98□□□□□ -0.33
HmgclP38060 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.98□□□□□ -0.33
HmgclP38060 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.98□□□□□ -0.33
HmgclP38060 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.98□□□□□ -0.33
HmgclP38060 Gm10012-201ENSMUST00000078252 192 ntBASIC12.98□□□□□ -0.33
HmgclP38060 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.98□□□□□ -0.33
HmgclP38060 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HmgclP38060 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.98□□□□□ -0.33
HmgclP38060 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HmgclP38060 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
HmgclP38060 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HmgclP38060 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.98□□□□□ -0.33
HmgclP38060 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HmgclP38060 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
HmgclP38060 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HmgclP38060 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HmgclP38060 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HmgclP38060 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HmgclP38060 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HmgclP38060 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
HmgclP38060 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HmgclP38060 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HmgclP38060 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HmgclP38060 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HmgclP38060 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HmgclP38060 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HmgclP38060 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HmgclP38060 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
HmgclP38060 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HmgclP38060 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HmgclP38060 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HmgclP38060 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.97□□□□□ -0.33
HmgclP38060 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HmgclP38060 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HmgclP38060 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HmgclP38060 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HmgclP38060 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
HmgclP38060 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HmgclP38060 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HmgclP38060 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.97□□□□□ -0.33
HmgclP38060 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.97□□□□□ -0.33
HmgclP38060 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.97□□□□□ -0.33
HmgclP38060 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HmgclP38060 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HmgclP38060 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HmgclP38060 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
HmgclP38060 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HmgclP38060 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HmgclP38060 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.97□□□□□ -0.33
HmgclP38060 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HmgclP38060 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HmgclP38060 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HmgclP38060 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HmgclP38060 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HmgclP38060 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HmgclP38060 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HmgclP38060 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HmgclP38060 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HmgclP38060 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
HmgclP38060 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HmgclP38060 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
HmgclP38060 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HmgclP38060 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.97□□□□□ -0.33
HmgclP38060 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HmgclP38060 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.97□□□□□ -0.33
HmgclP38060 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.96□□□□□ -0.33
HmgclP38060 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
HmgclP38060 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
HmgclP38060 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.96□□□□□ -0.33
HmgclP38060 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
HmgclP38060 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HmgclP38060 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
HmgclP38060 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.96□□□□□ -0.33
HmgclP38060 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.96□□□□□ -0.33
HmgclP38060 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HmgclP38060 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HmgclP38060 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
HmgclP38060 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
HmgclP38060 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.96□□□□□ -0.33
HmgclP38060 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.96□□□□□ -0.33
HmgclP38060 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HmgclP38060 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.96□□□□□ -0.33
HmgclP38060 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.96□□□□□ -0.33
HmgclP38060 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
HmgclP38060 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
HmgclP38060 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms