Protein–RNA interactions for Protein: P37913

Lig1, DNA ligase 1, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1P37913 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.98□□□□□ -0.01
Lig1P37913 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lig1P37913 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lig1P37913 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lig1P37913 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lig1P37913 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Lig1P37913 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.98□□□□□ -0.01
Lig1P37913 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lig1P37913 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.98□□□□□ -0.01
Lig1P37913 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Lig1P37913 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lig1P37913 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig1P37913 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig1P37913 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig1P37913 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig1P37913 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig1P37913 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig1P37913 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig1P37913 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig1P37913 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.97□□□□□ -0.01
Lig1P37913 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig1P37913 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig1P37913 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lig1P37913 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lig1P37913 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Lig1P37913 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Lig1P37913 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Lig1P37913 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Lig1P37913 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Lig1P37913 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Lig1P37913 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig1P37913 Gm24548-201ENSMUST00000158650 108 ntBASIC14.97□□□□□ -0.01
Lig1P37913 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.97□□□□□ -0.01
Lig1P37913 Gm28693-202ENSMUST00000190758 331 ntBASIC14.97□□□□□ -0.01
Lig1P37913 Gm37489-201ENSMUST00000191883 159 ntBASIC14.97□□□□□ -0.01
Lig1P37913 Gm18584-201ENSMUST00000203098 964 ntBASIC14.97□□□□□ -0.01
Lig1P37913 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.97□□□□□ -0.01
Lig1P37913 Gm5781-201ENSMUST00000219792 443 ntBASIC14.97□□□□□ -0.01
Lig1P37913 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lig1P37913 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig1P37913 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig1P37913 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lig1P37913 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig1P37913 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig1P37913 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig1P37913 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig1P37913 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Lig1P37913 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig1P37913 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig1P37913 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lig1P37913 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig1P37913 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig1P37913 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lig1P37913 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Lig1P37913 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.97□□□□□ -0.01
Lig1P37913 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig1P37913 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lig1P37913 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Lig1P37913 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lig1P37913 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lig1P37913 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.96□□□□□ -0.01
Lig1P37913 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lig1P37913 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lig1P37913 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.96□□□□□ -0.01
Lig1P37913 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lig1P37913 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lig1P37913 Gm22323-201ENSMUST00000103832 109 ntBASIC14.96□□□□□ -0.01
Lig1P37913 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lig1P37913 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lig1P37913 Gm4986-201ENSMUST00000119731 549 ntBASIC14.96□□□□□ -0.01
Lig1P37913 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Lig1P37913 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lig1P37913 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.96□□□□□ -0.01
Lig1P37913 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.96□□□□□ -0.01
Lig1P37913 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lig1P37913 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lig1P37913 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lig1P37913 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lig1P37913 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lig1P37913 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Lig1P37913 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lig1P37913 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lig1P37913 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lig1P37913 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lig1P37913 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.96□□□□□ -0.02
Lig1P37913 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
Lig1P37913 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Lig1P37913 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Lig1P37913 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lig1P37913 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lig1P37913 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.95□□□□□ -0.02
Lig1P37913 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Lig1P37913 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Lig1P37913 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Lig1P37913 Gm15370-201ENSMUST00000117158 253 ntBASIC14.95□□□□□ -0.02
Lig1P37913 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lig1P37913 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.95□□□□□ -0.02
Lig1P37913 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Lig1P37913 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.95□□□□□ -0.02
Lig1P37913 Gm26083-201ENSMUST00000157904 193 ntBASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms