Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LdlrP35951 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LdlrP35951 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LdlrP35951 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LdlrP35951 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LdlrP35951 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LdlrP35951 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.13□□□□□ -0.31
LdlrP35951 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LdlrP35951 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
LdlrP35951 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LdlrP35951 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LdlrP35951 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LdlrP35951 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.13□□□□□ -0.31
LdlrP35951 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LdlrP35951 Gm15824-201ENSMUST00000119516 955 ntBASIC13.13□□□□□ -0.31
LdlrP35951 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.13□□□□□ -0.31
LdlrP35951 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.13□□□□□ -0.31
LdlrP35951 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.13□□□□□ -0.31
LdlrP35951 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.13□□□□□ -0.31
LdlrP35951 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LdlrP35951 Gm17150-201ENSMUST00000165577 381 ntBASIC13.13□□□□□ -0.31
LdlrP35951 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LdlrP35951 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LdlrP35951 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.13□□□□□ -0.31
LdlrP35951 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LdlrP35951 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LdlrP35951 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LdlrP35951 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LdlrP35951 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LdlrP35951 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LdlrP35951 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.13□□□□□ -0.31
LdlrP35951 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LdlrP35951 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LdlrP35951 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LdlrP35951 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LdlrP35951 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LdlrP35951 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LdlrP35951 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LdlrP35951 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LdlrP35951 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
LdlrP35951 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LdlrP35951 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LdlrP35951 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LdlrP35951 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LdlrP35951 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
LdlrP35951 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LdlrP35951 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LdlrP35951 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LdlrP35951 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LdlrP35951 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LdlrP35951 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LdlrP35951 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LdlrP35951 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LdlrP35951 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LdlrP35951 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LdlrP35951 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.12□□□□□ -0.31
LdlrP35951 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LdlrP35951 Gm15806-201ENSMUST00000120696 955 ntBASIC13.12□□□□□ -0.31
LdlrP35951 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.12□□□□□ -0.31
LdlrP35951 Gm11918-201ENSMUST00000121660 179 ntBASIC13.12□□□□□ -0.31
LdlrP35951 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LdlrP35951 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.12□□□□□ -0.31
LdlrP35951 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
LdlrP35951 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.12□□□□□ -0.31
LdlrP35951 Gm28760-201ENSMUST00000185995 736 ntBASIC13.12□□□□□ -0.31
LdlrP35951 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.12□□□□□ -0.31
LdlrP35951 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.12□□□□□ -0.31
LdlrP35951 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.12□□□□□ -0.31
LdlrP35951 Gm9797-201ENSMUST00000052902 613 ntBASIC13.12□□□□□ -0.31
LdlrP35951 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.12□□□□□ -0.31
LdlrP35951 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LdlrP35951 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
LdlrP35951 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
LdlrP35951 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LdlrP35951 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
LdlrP35951 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.12□□□□□ -0.31
LdlrP35951 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.12□□□□□ -0.31
LdlrP35951 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
LdlrP35951 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LdlrP35951 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LdlrP35951 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LdlrP35951 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LdlrP35951 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LdlrP35951 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LdlrP35951 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.11□□□□□ -0.31
LdlrP35951 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.11□□□□□ -0.31
LdlrP35951 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.11□□□□□ -0.31
LdlrP35951 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
LdlrP35951 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms