Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nedd8P29595 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.14□□□□□ -0.47
Nedd8P29595 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nedd8P29595 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nedd8P29595 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Nedd8P29595 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nedd8P29595 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nedd8P29595 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nedd8P29595 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.14□□□□□ -0.47
Nedd8P29595 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nedd8P29595 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.14□□□□□ -0.47
Nedd8P29595 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.14□□□□□ -0.47
Nedd8P29595 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nedd8P29595 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nedd8P29595 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nedd8P29595 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
Nedd8P29595 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.13□□□□□ -0.47
Nedd8P29595 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nedd8P29595 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.13□□□□□ -0.47
Nedd8P29595 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.13□□□□□ -0.47
Nedd8P29595 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.13□□□□□ -0.47
Nedd8P29595 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.13□□□□□ -0.47
Nedd8P29595 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.13□□□□□ -0.47
Nedd8P29595 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.13□□□□□ -0.47
Nedd8P29595 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.13□□□□□ -0.47
Nedd8P29595 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Gm33142-201ENSMUST00000193913 867 ntBASIC12.13□□□□□ -0.47
Nedd8P29595 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.13□□□□□ -0.47
Nedd8P29595 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 AA619741-201ENSMUST00000195095 646 ntBASIC12.13□□□□□ -0.47
Nedd8P29595 Gm43347-201ENSMUST00000200226 580 ntBASIC12.13□□□□□ -0.47
Nedd8P29595 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.13□□□□□ -0.47
Nedd8P29595 Gm10252-201ENSMUST00000209541 832 ntBASIC12.13□□□□□ -0.47
Nedd8P29595 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.13□□□□□ -0.47
Nedd8P29595 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Nedd8P29595 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.13□□□□□ -0.47
Nedd8P29595 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nedd8P29595 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nedd8P29595 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nedd8P29595 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Nedd8P29595 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nedd8P29595 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nedd8P29595 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nedd8P29595 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Nedd8P29595 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nedd8P29595 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nedd8P29595 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nedd8P29595 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nedd8P29595 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nedd8P29595 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nedd8P29595 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nedd8P29595 Mir7221-201ENSMUST00000184009 72 ntBASIC12.12□□□□□ -0.47
Nedd8P29595 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.12□□□□□ -0.47
Nedd8P29595 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.12□□□□□ -0.47
Nedd8P29595 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nedd8P29595 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.12□□□□□ -0.47
Nedd8P29595 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nedd8P29595 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nedd8P29595 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.12□□□□□ -0.47
Nedd8P29595 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nedd8P29595 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nedd8P29595 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nedd8P29595 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nedd8P29595 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nedd8P29595 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nedd8P29595 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nedd8P29595 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nedd8P29595 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nedd8P29595 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nedd8P29595 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms