Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC15.06■□□□□ 0
Vcam1P29533 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Vcam1P29533 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Vcam1P29533 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vcam1P29533 Gm2546-201ENSMUST00000182630 991 ntBASIC15.06■□□□□ 0
Vcam1P29533 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC15.06■□□□□ 0
Vcam1P29533 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vcam1P29533 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vcam1P29533 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vcam1P29533 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vcam1P29533 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vcam1P29533 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vcam1P29533 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Vcam1P29533 AC154262.2-201ENSMUST00000224310 2293 ntBASIC15.06■□□□□ 0
Vcam1P29533 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Vcam1P29533 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vcam1P29533 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Vcam1P29533 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.06■□□□□ 0
Vcam1P29533 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Vcam1P29533 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vcam1P29533 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vcam1P29533 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vcam1P29533 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.05■□□□□ 0
Vcam1P29533 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ 0
Vcam1P29533 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Vcam1P29533 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vcam1P29533 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.05■□□□□ 0
Vcam1P29533 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Vcam1P29533 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vcam1P29533 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vcam1P29533 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.05■□□□□ 0
Vcam1P29533 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.05■□□□□ 0
Vcam1P29533 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.05■□□□□ 0
Vcam1P29533 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Vcam1P29533 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vcam1P29533 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vcam1P29533 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vcam1P29533 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC15.05■□□□□ -0
Vcam1P29533 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vcam1P29533 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC15.05■□□□□ -0
Vcam1P29533 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Vcam1P29533 Gm22058-201ENSMUST00000083393 310 ntBASIC15.05■□□□□ -0
Vcam1P29533 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Vcam1P29533 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.05■□□□□ -0
Vcam1P29533 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Vcam1P29533 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Vcam1P29533 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Vcam1P29533 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vcam1P29533 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vcam1P29533 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Vcam1P29533 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vcam1P29533 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vcam1P29533 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.04■□□□□ -0
Vcam1P29533 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vcam1P29533 Gm37737-201ENSMUST00000195013 1638 ntBASIC15.04■□□□□ -0
Vcam1P29533 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vcam1P29533 Gm3287-205ENSMUST00000228893 1332 ntBASIC15.04■□□□□ -0
Vcam1P29533 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vcam1P29533 Gm13492-201ENSMUST00000119772 665 ntBASIC15.04■□□□□ -0
Vcam1P29533 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vcam1P29533 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC15.04■□□□□ -0
Vcam1P29533 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC15.04■□□□□ -0
Vcam1P29533 Gm18827-201ENSMUST00000188341 790 ntBASIC15.04■□□□□ -0
Vcam1P29533 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC15.04■□□□□ -0
Vcam1P29533 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC15.04■□□□□ -0
Vcam1P29533 Gm9176-201ENSMUST00000219955 1120 ntBASIC15.04■□□□□ -0
Vcam1P29533 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vcam1P29533 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC15.04■□□□□ -0
Vcam1P29533 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC15.04■□□□□ -0
Vcam1P29533 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vcam1P29533 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Vcam1P29533 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Vcam1P29533 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Vcam1P29533 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vcam1P29533 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Vcam1P29533 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Vcam1P29533 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Vcam1P29533 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Vcam1P29533 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Vcam1P29533 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Vcam1P29533 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vcam1P29533 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vcam1P29533 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vcam1P29533 Gm6015-201ENSMUST00000217493 1586 ntBASIC15.03■□□□□ -0
Vcam1P29533 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vcam1P29533 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Vcam1P29533 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vcam1P29533 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC15.03■□□□□ -0
Vcam1P29533 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC15.03■□□□□ -0
Vcam1P29533 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC15.03■□□□□ -0
Vcam1P29533 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.03■□□□□ -0
Vcam1P29533 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Vcam1P29533 Gm23270-201ENSMUST00000104055 131 ntBASIC15.03■□□□□ -0
Vcam1P29533 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC15.03■□□□□ -0
Vcam1P29533 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vcam1P29533 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC15.03■□□□□ -0
Vcam1P29533 Gm8908-201ENSMUST00000121633 1024 ntBASIC15.03■□□□□ -0
Vcam1P29533 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vcam1P29533 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Vcam1P29533 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms