Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pde6bP23440 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.41□□□□□ -0.1
Pde6bP23440 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.41□□□□□ -0.1
Pde6bP23440 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6bP23440 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6bP23440 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6bP23440 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6bP23440 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6bP23440 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6bP23440 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6bP23440 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6bP23440 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Pde6bP23440 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pde6bP23440 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6bP23440 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pde6bP23440 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6bP23440 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pde6bP23440 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Pde6bP23440 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pde6bP23440 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.4□□□□□ -0.1
Pde6bP23440 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pde6bP23440 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pde6bP23440 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Pde6bP23440 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pde6bP23440 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pde6bP23440 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pde6bP23440 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pde6bP23440 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.4□□□□□ -0.1
Pde6bP23440 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pde6bP23440 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pde6bP23440 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pde6bP23440 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.4□□□□□ -0.1
Pde6bP23440 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.4□□□□□ -0.1
Pde6bP23440 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pde6bP23440 Gm3961-201ENSMUST00000204425 994 ntBASIC14.4□□□□□ -0.1
Pde6bP23440 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pde6bP23440 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pde6bP23440 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Pde6bP23440 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pde6bP23440 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pde6bP23440 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pde6bP23440 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pde6bP23440 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pde6bP23440 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pde6bP23440 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
Pde6bP23440 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pde6bP23440 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.4□□□□□ -0.1
Pde6bP23440 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pde6bP23440 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pde6bP23440 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Pde6bP23440 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Pde6bP23440 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pde6bP23440 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pde6bP23440 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pde6bP23440 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.39□□□□□ -0.11
Pde6bP23440 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pde6bP23440 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.39□□□□□ -0.11
Pde6bP23440 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pde6bP23440 Mir686-201ENSMUST00000102174 109 ntBASIC14.39□□□□□ -0.11
Pde6bP23440 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Pde6bP23440 Gm14350-201ENSMUST00000116642 640 ntBASIC14.39□□□□□ -0.11
Pde6bP23440 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.39□□□□□ -0.11
Pde6bP23440 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC14.39□□□□□ -0.11
Pde6bP23440 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pde6bP23440 Gm43822-201ENSMUST00000200285 476 ntBASIC14.39□□□□□ -0.11
Pde6bP23440 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.39□□□□□ -0.11
Pde6bP23440 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.39□□□□□ -0.11
Pde6bP23440 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.39□□□□□ -0.11
Pde6bP23440 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.39□□□□□ -0.11
Pde6bP23440 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pde6bP23440 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pde6bP23440 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pde6bP23440 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pde6bP23440 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pde6bP23440 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pde6bP23440 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pde6bP23440 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pde6bP23440 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
Pde6bP23440 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pde6bP23440 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pde6bP23440 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pde6bP23440 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pde6bP23440 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6bP23440 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pde6bP23440 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6bP23440 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6bP23440 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6bP23440 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6bP23440 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6bP23440 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.38□□□□□ -0.11
Pde6bP23440 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6bP23440 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6bP23440 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6bP23440 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.38□□□□□ -0.11
Pde6bP23440 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6bP23440 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.38□□□□□ -0.11
Pde6bP23440 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.38□□□□□ -0.11
Pde6bP23440 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.38□□□□□ -0.11
Pde6bP23440 Gm27501-201ENSMUST00000183599 107 ntBASIC14.38□□□□□ -0.11
Pde6bP23440 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms