Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf9P20334 AC155258.1-201ENSMUST00000219303 253 ntBASIC10.92□□□□□ -0.66
Tnfrsf9P20334 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC10.92□□□□□ -0.66
Tnfrsf9P20334 AC102542.1-201ENSMUST00000225204 1138 ntBASIC10.92□□□□□ -0.66
Tnfrsf9P20334 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf9P20334 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf9P20334 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf9P20334 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC10.92□□□□□ -0.66
Tnfrsf9P20334 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf9P20334 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC10.92□□□□□ -0.66
Tnfrsf9P20334 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf9P20334 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf9P20334 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Tnfrsf9P20334 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Tnfrsf9P20334 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf9P20334 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf9P20334 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Tnfrsf9P20334 Gm19863-201ENSMUST00000192480 2218 ntBASIC10.92□□□□□ -0.66
Tnfrsf9P20334 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Tnfrsf9P20334 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf9P20334 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf9P20334 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf9P20334 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Gm8775-201ENSMUST00000170943 1327 ntBASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Gm2495-201ENSMUST00000191160 466 ntBASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Gm43066-201ENSMUST00000199589 1260 ntBASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Gm7561-201ENSMUST00000211203 886 ntBASIC10.91□□□□□ -0.66
Tnfrsf9P20334 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf9P20334 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Gm37447-201ENSMUST00000195625 2928 ntBASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.9□□□□□ -0.66
Tnfrsf9P20334 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms