Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Srp54P14576 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Srp54P14576 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Srp54P14576 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Srp54P14576 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.97□□□□□ -0.33
Srp54P14576 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Srp54P14576 Gm5187-201ENSMUST00000117317 991 ntBASIC12.97□□□□□ -0.33
Srp54P14576 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Srp54P14576 Gm6447-201ENSMUST00000118905 835 ntBASIC12.97□□□□□ -0.33
Srp54P14576 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.97□□□□□ -0.33
Srp54P14576 Gm27514-201ENSMUST00000183692 110 ntBASIC12.97□□□□□ -0.33
Srp54P14576 Gm27682-201ENSMUST00000183930 110 ntBASIC12.97□□□□□ -0.33
Srp54P14576 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Srp54P14576 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Srp54P14576 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Srp54P14576 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Srp54P14576 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Srp54P14576 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Srp54P14576 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.97□□□□□ -0.33
Srp54P14576 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Srp54P14576 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Srp54P14576 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Srp54P14576 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Srp54P14576 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Srp54P14576 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.97□□□□□ -0.33
Srp54P14576 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Srp54P14576 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Srp54P14576 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Srp54P14576 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Srp54P14576 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Srp54P14576 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Srp54P14576 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Srp54P14576 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Srp54P14576 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.96□□□□□ -0.33
Srp54P14576 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.96□□□□□ -0.33
Srp54P14576 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Srp54P14576 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Srp54P14576 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Srp54P14576 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Srp54P14576 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Srp54P14576 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Srp54P14576 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Srp54P14576 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Srp54P14576 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.96□□□□□ -0.33
Srp54P14576 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.96□□□□□ -0.33
Srp54P14576 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.96□□□□□ -0.33
Srp54P14576 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Srp54P14576 Gm23931-201ENSMUST00000103842 109 ntBASIC12.96□□□□□ -0.33
Srp54P14576 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Srp54P14576 Gm16202-201ENSMUST00000117532 544 ntBASIC12.96□□□□□ -0.33
Srp54P14576 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.96□□□□□ -0.33
Srp54P14576 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Srp54P14576 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Srp54P14576 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Srp54P14576 Gm27572-201ENSMUST00000183702 255 ntBASIC12.96□□□□□ -0.33
Srp54P14576 Gm44069-201ENSMUST00000204898 506 ntBASIC12.96□□□□□ -0.33
Srp54P14576 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.96□□□□□ -0.33
Srp54P14576 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Srp54P14576 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Srp54P14576 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Srp54P14576 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Srp54P14576 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Srp54P14576 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Srp54P14576 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Srp54P14576 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Srp54P14576 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Srp54P14576 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Srp54P14576 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Srp54P14576 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Srp54P14576 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Srp54P14576 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Srp54P14576 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Srp54P14576 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Srp54P14576 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Srp54P14576 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Srp54P14576 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Srp54P14576 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.96□□□□□ -0.34
Srp54P14576 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.96□□□□□ -0.34
Srp54P14576 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.96□□□□□ -0.34
Srp54P14576 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.96□□□□□ -0.34
Srp54P14576 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Srp54P14576 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Srp54P14576 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Srp54P14576 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Srp54P14576 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.95□□□□□ -0.34
Srp54P14576 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Srp54P14576 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Srp54P14576 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Srp54P14576 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Srp54P14576 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Srp54P14576 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Srp54P14576 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Srp54P14576 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Srp54P14576 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Srp54P14576 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Srp54P14576 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Srp54P14576 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Srp54P14576 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Srp54P14576 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Srp54P14576 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms