Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
Ccl1P10146 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC10.19□□□□□ -0.78
Ccl1P10146 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC10.19□□□□□ -0.78
Ccl1P10146 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Ccl1P10146 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC10.19□□□□□ -0.78
Ccl1P10146 Gm6226-201ENSMUST00000117765 1146 ntBASIC10.19□□□□□ -0.78
Ccl1P10146 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Gm1401-201ENSMUST00000122048 772 ntBASIC10.19□□□□□ -0.78
Ccl1P10146 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC10.19□□□□□ -0.78
Ccl1P10146 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Ccl1P10146 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Gm27631-201ENSMUST00000184163 466 ntBASIC10.19□□□□□ -0.78
Ccl1P10146 Gm38225-201ENSMUST00000194001 393 ntBASIC10.19□□□□□ -0.78
Ccl1P10146 Gm44492-201ENSMUST00000197012 141 ntBASIC10.19□□□□□ -0.78
Ccl1P10146 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC10.19□□□□□ -0.78
Ccl1P10146 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC10.19□□□□□ -0.78
Ccl1P10146 Gm45453-201ENSMUST00000211758 853 ntBASIC10.19□□□□□ -0.78
Ccl1P10146 Gm7229-201ENSMUST00000214719 1007 ntBASIC10.19□□□□□ -0.78
Ccl1P10146 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.19□□□□□ -0.78
Ccl1P10146 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.19□□□□□ -0.78
Ccl1P10146 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Ccl1P10146 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.19□□□□□ -0.78
Ccl1P10146 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Ccl1P10146 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Ccl1P10146 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.19□□□□□ -0.78
Ccl1P10146 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.18□□□□□ -0.78
Ccl1P10146 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
Ccl1P10146 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Ccl1P10146 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC10.18□□□□□ -0.78
Ccl1P10146 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC10.18□□□□□ -0.78
Ccl1P10146 Gm5864-201ENSMUST00000202263 970 ntBASIC10.18□□□□□ -0.78
Ccl1P10146 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC10.18□□□□□ -0.78
Ccl1P10146 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC10.18□□□□□ -0.78
Ccl1P10146 AC166341.4-201ENSMUST00000220625 123 ntBASIC10.18□□□□□ -0.78
Ccl1P10146 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 Gm3695-201ENSMUST00000087222 1009 ntBASIC10.18□□□□□ -0.78
Ccl1P10146 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Ccl1P10146 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
Ccl1P10146 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl1P10146 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Ccl1P10146 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
Ccl1P10146 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Ccl1P10146 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl1P10146 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms