Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.36□□□□□ -0.11
Chmp6P0C0A3 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Gm12928-201ENSMUST00000117115 573 ntBASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Gm38144-201ENSMUST00000192790 465 ntBASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp6P0C0A3 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.34□□□□□ -0.11
Chmp6P0C0A3 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Gm5356-201ENSMUST00000093326 615 ntBASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms