Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxd3P09027 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Hoxd3P09027 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxd3P09027 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxd3P09027 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxd3P09027 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxd3P09027 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxd3P09027 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxd3P09027 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxd3P09027 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Hoxd3P09027 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxd3P09027 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxd3P09027 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC10.36□□□□□ -0.75
Hoxd3P09027 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxd3P09027 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxd3P09027 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxd3P09027 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxd3P09027 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxd3P09027 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxd3P09027 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxd3P09027 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC10.36□□□□□ -0.75
Hoxd3P09027 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxd3P09027 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxd3P09027 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxd3P09027 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxd3P09027 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Hoxd3P09027 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC10.35□□□□□ -0.75
Hoxd3P09027 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC10.35□□□□□ -0.75
Hoxd3P09027 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Hoxd3P09027 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 Gm14435-201ENSMUST00000108995 643 ntAPPRIS P5 TSL 2 BASIC10.35□□□□□ -0.75
Hoxd3P09027 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.35□□□□□ -0.75
Hoxd3P09027 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.35□□□□□ -0.75
Hoxd3P09027 Gm24644-201ENSMUST00000157114 139 ntBASIC10.35□□□□□ -0.75
Hoxd3P09027 Mir1982-201ENSMUST00000157368 74 ntBASIC10.35□□□□□ -0.75
Hoxd3P09027 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Hoxd3P09027 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Hoxd3P09027 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 Gm42442-201ENSMUST00000197951 1133 ntBASIC10.35□□□□□ -0.75
Hoxd3P09027 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.35□□□□□ -0.75
Hoxd3P09027 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC10.35□□□□□ -0.75
Hoxd3P09027 Gm36495-201ENSMUST00000221201 684 ntTSL 5 BASIC10.35□□□□□ -0.75
Hoxd3P09027 CT025552.1-201ENSMUST00000224561 521 ntBASIC10.35□□□□□ -0.75
Hoxd3P09027 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 Gm10012-201ENSMUST00000078252 192 ntBASIC10.35□□□□□ -0.75
Hoxd3P09027 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Hoxd3P09027 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC10.35□□□□□ -0.75
Hoxd3P09027 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC10.35□□□□□ -0.75
Hoxd3P09027 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Hoxd3P09027 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxd3P09027 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxd3P09027 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxd3P09027 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxd3P09027 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxd3P09027 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxd3P09027 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxd3P09027 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Hoxd3P09027 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC10.34□□□□□ -0.75
Hoxd3P09027 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxd3P09027 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Hoxd3P09027 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxd3P09027 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Hoxd3P09027 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxd3P09027 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxd3P09027 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxd3P09027 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxd3P09027 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxd3P09027 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxd3P09027 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxd3P09027 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Hoxd3P09027 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxd3P09027 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms