Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ApoeP08226 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.47□□□□□ -0.41
ApoeP08226 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
ApoeP08226 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
ApoeP08226 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
ApoeP08226 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.47□□□□□ -0.41
ApoeP08226 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
ApoeP08226 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
ApoeP08226 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.47□□□□□ -0.41
ApoeP08226 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.47□□□□□ -0.41
ApoeP08226 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.47□□□□□ -0.41
ApoeP08226 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
ApoeP08226 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 Gm43474-201ENSMUST00000196415 774 ntBASIC12.47□□□□□ -0.41
ApoeP08226 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.47□□□□□ -0.41
ApoeP08226 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.47□□□□□ -0.41
ApoeP08226 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.47□□□□□ -0.41
ApoeP08226 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.47□□□□□ -0.41
ApoeP08226 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.47□□□□□ -0.41
ApoeP08226 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
ApoeP08226 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.47□□□□□ -0.41
ApoeP08226 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
ApoeP08226 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.47□□□□□ -0.41
ApoeP08226 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.47□□□□□ -0.41
ApoeP08226 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ApoeP08226 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ApoeP08226 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ApoeP08226 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.46□□□□□ -0.41
ApoeP08226 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
ApoeP08226 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ApoeP08226 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ApoeP08226 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ApoeP08226 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ApoeP08226 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
ApoeP08226 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
ApoeP08226 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.46□□□□□ -0.41
ApoeP08226 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
ApoeP08226 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
ApoeP08226 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ApoeP08226 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.46□□□□□ -0.41
ApoeP08226 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ApoeP08226 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ApoeP08226 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ApoeP08226 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ApoeP08226 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ApoeP08226 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.46□□□□□ -0.41
ApoeP08226 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
ApoeP08226 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
ApoeP08226 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.46□□□□□ -0.41
ApoeP08226 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
ApoeP08226 Gm25911-201ENSMUST00000157621 56 ntBASIC12.46□□□□□ -0.41
ApoeP08226 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.46□□□□□ -0.41
ApoeP08226 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.46□□□□□ -0.41
ApoeP08226 Gm27533-201ENSMUST00000183800 152 ntBASIC12.46□□□□□ -0.41
ApoeP08226 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.46□□□□□ -0.41
ApoeP08226 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ApoeP08226 Gm18905-201ENSMUST00000205454 928 ntBASIC12.46□□□□□ -0.41
ApoeP08226 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
ApoeP08226 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ApoeP08226 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ApoeP08226 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.46□□□□□ -0.41
ApoeP08226 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ApoeP08226 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.46□□□□□ -0.41
ApoeP08226 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.46□□□□□ -0.41
ApoeP08226 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ApoeP08226 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
ApoeP08226 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
ApoeP08226 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ApoeP08226 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ApoeP08226 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.46□□□□□ -0.42
ApoeP08226 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms