Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.07□□□□□ -0.64
Hoxa3P02831 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.07□□□□□ -0.64
Hoxa3P02831 Gm24644-201ENSMUST00000157114 139 ntBASIC11.07□□□□□ -0.64
Hoxa3P02831 Gm22331-201ENSMUST00000158066 136 ntBASIC11.07□□□□□ -0.64
Hoxa3P02831 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Gm27731-201ENSMUST00000185192 107 ntBASIC11.07□□□□□ -0.64
Hoxa3P02831 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.07□□□□□ -0.64
Hoxa3P02831 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.07□□□□□ -0.64
Hoxa3P02831 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.07□□□□□ -0.64
Hoxa3P02831 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.07□□□□□ -0.64
Hoxa3P02831 Gm26315-201ENSMUST00000083890 321 ntBASIC11.07□□□□□ -0.64
Hoxa3P02831 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Hoxa3P02831 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Hoxa3P02831 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.07□□□□□ -0.64
Hoxa3P02831 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.07□□□□□ -0.64
Hoxa3P02831 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.07□□□□□ -0.64
Hoxa3P02831 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Hoxa3P02831 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Hoxa3P02831 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Hoxa3P02831 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.06□□□□□ -0.64
Hoxa3P02831 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.06□□□□□ -0.64
Hoxa3P02831 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Hoxa3P02831 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.06□□□□□ -0.64
Hoxa3P02831 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.06□□□□□ -0.64
Hoxa3P02831 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Hoxa3P02831 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 Gm10156-201ENSMUST00000122364 462 ntBASIC11.06□□□□□ -0.64
Hoxa3P02831 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.06□□□□□ -0.64
Hoxa3P02831 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.06□□□□□ -0.64
Hoxa3P02831 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 Gm38144-201ENSMUST00000192790 465 ntBASIC11.06□□□□□ -0.64
Hoxa3P02831 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.06□□□□□ -0.64
Hoxa3P02831 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.06□□□□□ -0.64
Hoxa3P02831 Itm2b-204ENSMUST00000228637 783 ntBASIC11.06□□□□□ -0.64
Hoxa3P02831 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Hoxa3P02831 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxa3P02831 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.05□□□□□ -0.64
Hoxa3P02831 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Hoxa3P02831 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 132.5 ms