Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vti1aO89116 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vti1aO89116 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vti1aO89116 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.21□□□□□ -0.13
Vti1aO89116 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Vti1aO89116 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vti1aO89116 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Vti1aO89116 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Vti1aO89116 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vti1aO89116 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Vti1aO89116 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.21□□□□□ -0.13
Vti1aO89116 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vti1aO89116 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vti1aO89116 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Vti1aO89116 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Vti1aO89116 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vti1aO89116 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vti1aO89116 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1aO89116 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Vti1aO89116 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1aO89116 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Vti1aO89116 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1aO89116 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1aO89116 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1aO89116 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1aO89116 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1aO89116 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.2□□□□□ -0.14
Vti1aO89116 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1aO89116 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1aO89116 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1aO89116 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1aO89116 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.2□□□□□ -0.14
Vti1aO89116 Gm27682-201ENSMUST00000183930 110 ntBASIC14.2□□□□□ -0.14
Vti1aO89116 Gm38266-201ENSMUST00000194931 421 ntBASIC14.2□□□□□ -0.14
Vti1aO89116 Gm43822-201ENSMUST00000200285 476 ntBASIC14.2□□□□□ -0.14
Vti1aO89116 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1aO89116 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1aO89116 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Vti1aO89116 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1aO89116 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1aO89116 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Vti1aO89116 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1aO89116 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1aO89116 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1aO89116 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.2□□□□□ -0.14
Vti1aO89116 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1aO89116 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Vti1aO89116 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.2□□□□□ -0.14
Vti1aO89116 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1aO89116 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1aO89116 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.2□□□□□ -0.14
Vti1aO89116 Acot6-202ENSMUST00000222921 3622 ntBASIC14.2□□□□□ -0.14
Vti1aO89116 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1aO89116 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.19□□□□□ -0.14
Vti1aO89116 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1aO89116 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1aO89116 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1aO89116 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1aO89116 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1aO89116 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1aO89116 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1aO89116 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1aO89116 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1aO89116 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Vti1aO89116 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.19□□□□□ -0.14
Vti1aO89116 Gm14723-201ENSMUST00000118686 215 ntBASIC14.19□□□□□ -0.14
Vti1aO89116 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.19□□□□□ -0.14
Vti1aO89116 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.19□□□□□ -0.14
Vti1aO89116 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.19□□□□□ -0.14
Vti1aO89116 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.19□□□□□ -0.14
Vti1aO89116 Gm12403-201ENSMUST00000121384 959 ntBASIC14.19□□□□□ -0.14
Vti1aO89116 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.19□□□□□ -0.14
Vti1aO89116 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.19□□□□□ -0.14
Vti1aO89116 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1aO89116 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.19□□□□□ -0.14
Vti1aO89116 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.19□□□□□ -0.14
Vti1aO89116 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.19□□□□□ -0.14
Vti1aO89116 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.19□□□□□ -0.14
Vti1aO89116 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.19□□□□□ -0.14
Vti1aO89116 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Vti1aO89116 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1aO89116 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.19□□□□□ -0.14
Vti1aO89116 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1aO89116 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1aO89116 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1aO89116 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1aO89116 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1aO89116 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1aO89116 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1aO89116 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1aO89116 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1aO89116 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1aO89116 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1aO89116 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Vti1aO89116 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.19□□□□□ -0.14
Vti1aO89116 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1aO89116 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1aO89116 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Vti1aO89116 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vti1aO89116 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms