Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
CcnkO88874 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CcnkO88874 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
CcnkO88874 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcnkO88874 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcnkO88874 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcnkO88874 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.76□□□□□ -0.53
CcnkO88874 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.76□□□□□ -0.53
CcnkO88874 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcnkO88874 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
CcnkO88874 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcnkO88874 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcnkO88874 Gm15460-201ENSMUST00000118147 391 ntBASIC11.76□□□□□ -0.53
CcnkO88874 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcnkO88874 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.76□□□□□ -0.53
CcnkO88874 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.76□□□□□ -0.53
CcnkO88874 Gm29741-201ENSMUST00000192667 421 ntBASIC11.76□□□□□ -0.53
CcnkO88874 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
CcnkO88874 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcnkO88874 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
CcnkO88874 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcnkO88874 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcnkO88874 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcnkO88874 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcnkO88874 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.76□□□□□ -0.53
CcnkO88874 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcnkO88874 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcnkO88874 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcnkO88874 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.76□□□□□ -0.53
CcnkO88874 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.76□□□□□ -0.53
CcnkO88874 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CcnkO88874 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcnkO88874 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcnkO88874 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CcnkO88874 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcnkO88874 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcnkO88874 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcnkO88874 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcnkO88874 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CcnkO88874 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcnkO88874 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcnkO88874 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CcnkO88874 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcnkO88874 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
CcnkO88874 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcnkO88874 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcnkO88874 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcnkO88874 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.75□□□□□ -0.53
CcnkO88874 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcnkO88874 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcnkO88874 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CcnkO88874 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcnkO88874 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcnkO88874 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.75□□□□□ -0.53
CcnkO88874 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.75□□□□□ -0.53
CcnkO88874 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.75□□□□□ -0.53
CcnkO88874 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CcnkO88874 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.75□□□□□ -0.53
CcnkO88874 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CcnkO88874 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CcnkO88874 Gm2445-201ENSMUST00000182798 989 ntBASIC11.75□□□□□ -0.53
CcnkO88874 Gm27618-201ENSMUST00000183671 60 ntBASIC11.75□□□□□ -0.53
CcnkO88874 Gm21470-201ENSMUST00000187680 696 ntBASIC11.75□□□□□ -0.53
CcnkO88874 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcnkO88874 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CcnkO88874 Gm44719-201ENSMUST00000206404 149 ntBASIC11.75□□□□□ -0.53
CcnkO88874 Gm44872-201ENSMUST00000207864 420 ntBASIC11.75□□□□□ -0.53
CcnkO88874 Gm46209-201ENSMUST00000217912 553 ntBASIC11.75□□□□□ -0.53
CcnkO88874 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcnkO88874 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcnkO88874 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcnkO88874 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcnkO88874 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcnkO88874 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcnkO88874 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcnkO88874 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CcnkO88874 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.75□□□□□ -0.53
CcnkO88874 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcnkO88874 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcnkO88874 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CcnkO88874 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CcnkO88874 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
CcnkO88874 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Gm12585-201ENSMUST00000117307 290 ntBASIC11.74□□□□□ -0.53
CcnkO88874 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.74□□□□□ -0.53
CcnkO88874 Gm14767-201ENSMUST00000121559 586 ntBASIC11.74□□□□□ -0.53
CcnkO88874 Gm4804-201ENSMUST00000182234 999 ntBASIC11.74□□□□□ -0.53
CcnkO88874 Gm27680-201ENSMUST00000184192 160 ntBASIC11.74□□□□□ -0.53
CcnkO88874 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.74□□□□□ -0.53
CcnkO88874 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms