Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarce1O54941 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarce1O54941 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.67■□□□□ 0.1
Smarce1O54941 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.67■□□□□ 0.1
Smarce1O54941 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.67■□□□□ 0.1
Smarce1O54941 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smarce1O54941 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC15.67■□□□□ 0.1
Smarce1O54941 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Smarce1O54941 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarce1O54941 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarce1O54941 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Smarce1O54941 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarce1O54941 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarce1O54941 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarce1O54941 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarce1O54941 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Smarce1O54941 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarce1O54941 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarce1O54941 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Smarce1O54941 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarce1O54941 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarce1O54941 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarce1O54941 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.66■□□□□ 0.1
Smarce1O54941 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarce1O54941 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC15.66■□□□□ 0.1
Smarce1O54941 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Smarce1O54941 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smarce1O54941 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.66■□□□□ 0.1
Smarce1O54941 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.66■□□□□ 0.1
Smarce1O54941 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarce1O54941 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Smarce1O54941 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smarce1O54941 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarce1O54941 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Smarce1O54941 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarce1O54941 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC15.66■□□□□ 0.1
Smarce1O54941 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarce1O54941 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarce1O54941 Gm9025-201ENSMUST00000122415 1575 ntBASIC15.66■□□□□ 0.1
Smarce1O54941 AC113060.1-201ENSMUST00000225689 1573 ntBASIC15.66■□□□□ 0.1
Smarce1O54941 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarce1O54941 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarce1O54941 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarce1O54941 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarce1O54941 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarce1O54941 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Smarce1O54941 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarce1O54941 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarce1O54941 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarce1O54941 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Smarce1O54941 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarce1O54941 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarce1O54941 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarce1O54941 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarce1O54941 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarce1O54941 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.65■□□□□ 0.1
Smarce1O54941 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarce1O54941 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarce1O54941 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarce1O54941 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Smarce1O54941 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.65■□□□□ 0.1
Smarce1O54941 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Smarce1O54941 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC15.65■□□□□ 0.1
Smarce1O54941 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.65■□□□□ 0.1
Smarce1O54941 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.65■□□□□ 0.1
Smarce1O54941 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.65■□□□□ 0.1
Smarce1O54941 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Smarce1O54941 Gm27838-201ENSMUST00000184829 128 ntBASIC15.65■□□□□ 0.1
Smarce1O54941 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.65■□□□□ 0.1
Smarce1O54941 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.65■□□□□ 0.1
Smarce1O54941 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.65■□□□□ 0.1
Smarce1O54941 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.65■□□□□ 0.1
Smarce1O54941 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.65■□□□□ 0.1
Smarce1O54941 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.65■□□□□ 0.1
Smarce1O54941 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarce1O54941 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarce1O54941 Gm9797-201ENSMUST00000052902 613 ntBASIC15.65■□□□□ 0.1
Smarce1O54941 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.65■□□□□ 0.1
Smarce1O54941 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Smarce1O54941 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarce1O54941 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.65■□□□□ 0.1
Smarce1O54941 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Smarce1O54941 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarce1O54941 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarce1O54941 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarce1O54941 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
Smarce1O54941 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarce1O54941 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Smarce1O54941 AC125108.1-201ENSMUST00000218986 2330 ntBASIC15.65■□□□□ 0.1
Smarce1O54941 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarce1O54941 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarce1O54941 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarce1O54941 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarce1O54941 Gm8798-201ENSMUST00000211877 1661 ntBASIC15.64■□□□□ 0.09
Smarce1O54941 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarce1O54941 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarce1O54941 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smarce1O54941 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarce1O54941 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarce1O54941 Gm15376-201ENSMUST00000122258 783 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms