Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1i3O35627 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1i3O35627 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.16□□□□□ -0.14
Nr1i3O35627 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.16□□□□□ -0.14
Nr1i3O35627 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1i3O35627 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.16□□□□□ -0.14
Nr1i3O35627 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1i3O35627 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1i3O35627 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1i3O35627 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.16□□□□□ -0.14
Nr1i3O35627 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1i3O35627 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.16□□□□□ -0.14
Nr1i3O35627 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1i3O35627 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1i3O35627 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.16□□□□□ -0.14
Nr1i3O35627 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1i3O35627 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1i3O35627 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1i3O35627 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1i3O35627 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1i3O35627 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1i3O35627 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1i3O35627 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1i3O35627 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Nr1i3O35627 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1i3O35627 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1i3O35627 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1i3O35627 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1i3O35627 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nr1i3O35627 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.15□□□□□ -0.14
Nr1i3O35627 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nr1i3O35627 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nr1i3O35627 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nr1i3O35627 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nr1i3O35627 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nr1i3O35627 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nr1i3O35627 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nr1i3O35627 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nr1i3O35627 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.15□□□□□ -0.14
Nr1i3O35627 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nr1i3O35627 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nr1i3O35627 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nr1i3O35627 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.15□□□□□ -0.14
Nr1i3O35627 Gm5687-201ENSMUST00000118252 640 ntBASIC14.15□□□□□ -0.14
Nr1i3O35627 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nr1i3O35627 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nr1i3O35627 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nr1i3O35627 Gm44397-201ENSMUST00000195950 113 ntBASIC14.15□□□□□ -0.14
Nr1i3O35627 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.15□□□□□ -0.14
Nr1i3O35627 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Nr1i3O35627 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nr1i3O35627 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nr1i3O35627 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nr1i3O35627 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Nr1i3O35627 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nr1i3O35627 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nr1i3O35627 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.15□□□□□ -0.14
Nr1i3O35627 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nr1i3O35627 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nr1i3O35627 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
Nr1i3O35627 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.15□□□□□ -0.15
Nr1i3O35627 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nr1i3O35627 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nr1i3O35627 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nr1i3O35627 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nr1i3O35627 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.14□□□□□ -0.15
Nr1i3O35627 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.14□□□□□ -0.15
Nr1i3O35627 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nr1i3O35627 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nr1i3O35627 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nr1i3O35627 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nr1i3O35627 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nr1i3O35627 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.14□□□□□ -0.15
Nr1i3O35627 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nr1i3O35627 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nr1i3O35627 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.14□□□□□ -0.15
Nr1i3O35627 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nr1i3O35627 Gm28631-201ENSMUST00000190740 334 ntBASIC14.14□□□□□ -0.15
Nr1i3O35627 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nr1i3O35627 Gm6983-201ENSMUST00000214912 628 ntBASIC14.14□□□□□ -0.15
Nr1i3O35627 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.14□□□□□ -0.15
Nr1i3O35627 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.14□□□□□ -0.15
Nr1i3O35627 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.14□□□□□ -0.15
Nr1i3O35627 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nr1i3O35627 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nr1i3O35627 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nr1i3O35627 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nr1i3O35627 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nr1i3O35627 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nr1i3O35627 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.14□□□□□ -0.15
Nr1i3O35627 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nr1i3O35627 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nr1i3O35627 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nr1i3O35627 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nr1i3O35627 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nr1i3O35627 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nr1i3O35627 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nr1i3O35627 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1i3O35627 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1i3O35627 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms