Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clk2O35491 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clk2O35491 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clk2O35491 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.27□□□□□ -0.12
Clk2O35491 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.27□□□□□ -0.13
Clk2O35491 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.27□□□□□ -0.13
Clk2O35491 Gm13786-201ENSMUST00000122371 333 ntBASIC14.27□□□□□ -0.13
Clk2O35491 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Clk2O35491 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.27□□□□□ -0.13
Clk2O35491 Gm18584-201ENSMUST00000203098 964 ntBASIC14.27□□□□□ -0.13
Clk2O35491 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clk2O35491 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clk2O35491 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clk2O35491 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Clk2O35491 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Clk2O35491 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clk2O35491 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Clk2O35491 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clk2O35491 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clk2O35491 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clk2O35491 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.27□□□□□ -0.13
Clk2O35491 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Clk2O35491 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clk2O35491 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.27□□□□□ -0.13
Clk2O35491 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clk2O35491 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clk2O35491 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clk2O35491 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clk2O35491 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Clk2O35491 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clk2O35491 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clk2O35491 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clk2O35491 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk2O35491 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
Clk2O35491 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk2O35491 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk2O35491 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk2O35491 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Clk2O35491 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk2O35491 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk2O35491 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk2O35491 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk2O35491 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk2O35491 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk2O35491 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clk2O35491 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.26□□□□□ -0.13
Clk2O35491 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.26□□□□□ -0.13
Clk2O35491 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk2O35491 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.26□□□□□ -0.13
Clk2O35491 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.26□□□□□ -0.13
Clk2O35491 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clk2O35491 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.26□□□□□ -0.13
Clk2O35491 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.26□□□□□ -0.13
Clk2O35491 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.26□□□□□ -0.13
Clk2O35491 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.26□□□□□ -0.13
Clk2O35491 Olfr284-202ENSMUST00000206647 966 ntBASIC14.26□□□□□ -0.13
Clk2O35491 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.26□□□□□ -0.13
Clk2O35491 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clk2O35491 AC154532.1-201ENSMUST00000227860 965 ntBASIC14.26□□□□□ -0.13
Clk2O35491 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.26□□□□□ -0.13
Clk2O35491 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk2O35491 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Clk2O35491 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk2O35491 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clk2O35491 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Clk2O35491 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk2O35491 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Clk2O35491 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.26□□□□□ -0.13
Clk2O35491 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.26□□□□□ -0.13
Clk2O35491 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk2O35491 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.26□□□□□ -0.13
Clk2O35491 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk2O35491 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk2O35491 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Clk2O35491 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk2O35491 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clk2O35491 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clk2O35491 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clk2O35491 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clk2O35491 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clk2O35491 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.25□□□□□ -0.13
Clk2O35491 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.25□□□□□ -0.13
Clk2O35491 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clk2O35491 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clk2O35491 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.25□□□□□ -0.13
Clk2O35491 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clk2O35491 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clk2O35491 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clk2O35491 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clk2O35491 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.25□□□□□ -0.13
Clk2O35491 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clk2O35491 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Clk2O35491 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.25□□□□□ -0.13
Clk2O35491 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.25□□□□□ -0.13
Clk2O35491 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.25□□□□□ -0.13
Clk2O35491 Gm24548-201ENSMUST00000158650 108 ntBASIC14.25□□□□□ -0.13
Clk2O35491 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clk2O35491 Gm27516-201ENSMUST00000184237 98 ntBASIC14.25□□□□□ -0.13
Clk2O35491 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Clk2O35491 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms