Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac1O09106 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC15.68■□□□□ 0.1
Hdac1O09106 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac1O09106 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac1O09106 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac1O09106 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Hdac1O09106 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.68■□□□□ 0.1
Hdac1O09106 Gm6736-201ENSMUST00000166583 948 ntBASIC15.68■□□□□ 0.1
Hdac1O09106 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.68■□□□□ 0.1
Hdac1O09106 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac1O09106 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac1O09106 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac1O09106 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac1O09106 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Hdac1O09106 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac1O09106 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC15.68■□□□□ 0.1
Hdac1O09106 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Hdac1O09106 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac1O09106 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac1O09106 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.68■□□□□ 0.1
Hdac1O09106 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac1O09106 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac1O09106 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Hdac1O09106 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac1O09106 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac1O09106 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac1O09106 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac1O09106 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac1O09106 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac1O09106 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac1O09106 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac1O09106 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac1O09106 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac1O09106 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac1O09106 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac1O09106 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac1O09106 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac1O09106 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac1O09106 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac1O09106 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.67■□□□□ 0.1
Hdac1O09106 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.67■□□□□ 0.1
Hdac1O09106 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac1O09106 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.67■□□□□ 0.1
Hdac1O09106 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac1O09106 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC15.67■□□□□ 0.1
Hdac1O09106 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac1O09106 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac1O09106 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Hdac1O09106 Gm37391-201ENSMUST00000194891 2318 ntBASIC15.67■□□□□ 0.1
Hdac1O09106 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Hdac1O09106 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hdac1O09106 Gm44094-201ENSMUST00000204703 2030 ntBASIC15.67■□□□□ 0.1
Hdac1O09106 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hdac1O09106 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Hdac1O09106 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hdac1O09106 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hdac1O09106 Gm18263-201ENSMUST00000220846 1928 ntBASIC15.66■□□□□ 0.1
Hdac1O09106 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hdac1O09106 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hdac1O09106 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC15.66■□□□□ 0.1
Hdac1O09106 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hdac1O09106 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hdac1O09106 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hdac1O09106 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hdac1O09106 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hdac1O09106 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC15.66■□□□□ 0.1
Hdac1O09106 Gm11978-201ENSMUST00000122315 466 ntBASIC15.66■□□□□ 0.1
Hdac1O09106 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC15.66■□□□□ 0.1
Hdac1O09106 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hdac1O09106 Gm43575-201ENSMUST00000196420 516 ntBASIC15.66■□□□□ 0.1
Hdac1O09106 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.66■□□□□ 0.1
Hdac1O09106 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hdac1O09106 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hdac1O09106 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hdac1O09106 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Hdac1O09106 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hdac1O09106 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hdac1O09106 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hdac1O09106 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.66■□□□□ 0.1
Hdac1O09106 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Hdac1O09106 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Hdac1O09106 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hdac1O09106 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hdac1O09106 AC159195.1-201ENSMUST00000225867 2086 ntBASIC15.66■□□□□ 0.1
Hdac1O09106 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Hdac1O09106 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hdac1O09106 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hdac1O09106 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hdac1O09106 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC15.65■□□□□ 0.1
Hdac1O09106 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hdac1O09106 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hdac1O09106 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hdac1O09106 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Hdac1O09106 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hdac1O09106 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.65■□□□□ 0.1
Hdac1O09106 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hdac1O09106 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hdac1O09106 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hdac1O09106 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hdac1O09106 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms