Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trove2O08848 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trove2O08848 Gm46209-201ENSMUST00000217912 553 ntBASIC13.55□□□□□ -0.24
Trove2O08848 Gm9229-201ENSMUST00000222777 126 ntBASIC13.55□□□□□ -0.24
Trove2O08848 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trove2O08848 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trove2O08848 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trove2O08848 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trove2O08848 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trove2O08848 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.55□□□□□ -0.24
Trove2O08848 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trove2O08848 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trove2O08848 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trove2O08848 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trove2O08848 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trove2O08848 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trove2O08848 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trove2O08848 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trove2O08848 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trove2O08848 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trove2O08848 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.54□□□□□ -0.24
Trove2O08848 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trove2O08848 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trove2O08848 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trove2O08848 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trove2O08848 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Trove2O08848 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trove2O08848 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trove2O08848 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trove2O08848 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trove2O08848 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.54□□□□□ -0.24
Trove2O08848 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trove2O08848 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trove2O08848 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.54□□□□□ -0.24
Trove2O08848 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.54□□□□□ -0.24
Trove2O08848 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.54□□□□□ -0.24
Trove2O08848 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trove2O08848 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trove2O08848 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trove2O08848 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trove2O08848 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trove2O08848 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trove2O08848 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trove2O08848 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trove2O08848 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.54□□□□□ -0.24
Trove2O08848 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trove2O08848 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trove2O08848 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trove2O08848 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trove2O08848 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trove2O08848 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trove2O08848 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trove2O08848 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.54□□□□□ -0.24
Trove2O08848 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trove2O08848 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trove2O08848 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trove2O08848 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trove2O08848 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trove2O08848 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trove2O08848 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trove2O08848 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trove2O08848 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trove2O08848 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.53□□□□□ -0.24
Trove2O08848 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trove2O08848 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trove2O08848 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trove2O08848 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Trove2O08848 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trove2O08848 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.53□□□□□ -0.24
Trove2O08848 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trove2O08848 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trove2O08848 Gm14767-201ENSMUST00000121559 586 ntBASIC13.53□□□□□ -0.24
Trove2O08848 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Trove2O08848 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.53□□□□□ -0.24
Trove2O08848 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trove2O08848 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trove2O08848 Gm27618-201ENSMUST00000183671 60 ntBASIC13.53□□□□□ -0.24
Trove2O08848 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.53□□□□□ -0.24
Trove2O08848 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.53□□□□□ -0.24
Trove2O08848 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trove2O08848 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.53□□□□□ -0.24
Trove2O08848 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trove2O08848 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trove2O08848 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trove2O08848 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trove2O08848 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trove2O08848 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trove2O08848 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.53□□□□□ -0.24
Trove2O08848 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trove2O08848 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trove2O08848 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.53□□□□□ -0.24
Trove2O08848 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trove2O08848 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trove2O08848 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.53□□□□□ -0.24
Trove2O08848 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trove2O08848 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trove2O08848 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trove2O08848 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trove2O08848 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.53□□□□□ -0.24
Trove2O08848 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms