Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf3O08791 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.71□□□□□ -0.21
Ebf3O08791 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Ebf3O08791 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf3O08791 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.71□□□□□ -0.21
Ebf3O08791 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.71□□□□□ -0.21
Ebf3O08791 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.71□□□□□ -0.21
Ebf3O08791 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Ebf3O08791 Gm27501-201ENSMUST00000183599 107 ntBASIC13.71□□□□□ -0.21
Ebf3O08791 Gm45930-201ENSMUST00000221330 292 ntBASIC13.71□□□□□ -0.21
Ebf3O08791 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.71□□□□□ -0.21
Ebf3O08791 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.71□□□□□ -0.21
Ebf3O08791 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf3O08791 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf3O08791 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf3O08791 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf3O08791 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.71□□□□□ -0.21
Ebf3O08791 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf3O08791 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf3O08791 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.71□□□□□ -0.21
Ebf3O08791 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf3O08791 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.71□□□□□ -0.21
Ebf3O08791 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf3O08791 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf3O08791 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf3O08791 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ebf3O08791 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ebf3O08791 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ebf3O08791 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ebf3O08791 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Ebf3O08791 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Ebf3O08791 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ebf3O08791 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ebf3O08791 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf3O08791 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ebf3O08791 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf3O08791 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf3O08791 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf3O08791 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf3O08791 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf3O08791 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf3O08791 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf3O08791 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf3O08791 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ebf3O08791 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf3O08791 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ebf3O08791 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf3O08791 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf3O08791 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.7□□□□□ -0.22
Ebf3O08791 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.7□□□□□ -0.22
Ebf3O08791 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.7□□□□□ -0.22
Ebf3O08791 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.7□□□□□ -0.22
Ebf3O08791 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf3O08791 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf3O08791 Gm38266-201ENSMUST00000194931 421 ntBASIC13.7□□□□□ -0.22
Ebf3O08791 Gm37497-201ENSMUST00000195830 798 ntBASIC13.7□□□□□ -0.22
Ebf3O08791 Gm43822-201ENSMUST00000200285 476 ntBASIC13.7□□□□□ -0.22
Ebf3O08791 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.7□□□□□ -0.22
Ebf3O08791 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Ebf3O08791 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf3O08791 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf3O08791 Gm18041-201ENSMUST00000218210 618 ntBASIC13.7□□□□□ -0.22
Ebf3O08791 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.7□□□□□ -0.22
Ebf3O08791 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.7□□□□□ -0.22
Ebf3O08791 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.7□□□□□ -0.22
Ebf3O08791 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ebf3O08791 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ebf3O08791 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf3O08791 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.7□□□□□ -0.22
Ebf3O08791 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf3O08791 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf3O08791 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf3O08791 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf3O08791 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf3O08791 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf3O08791 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.69□□□□□ -0.22
Ebf3O08791 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.69□□□□□ -0.22
Ebf3O08791 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf3O08791 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf3O08791 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ebf3O08791 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf3O08791 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ebf3O08791 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf3O08791 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf3O08791 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf3O08791 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf3O08791 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf3O08791 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf3O08791 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.69□□□□□ -0.22
Ebf3O08791 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.69□□□□□ -0.22
Ebf3O08791 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf3O08791 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf3O08791 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
Ebf3O08791 Mir686-201ENSMUST00000102174 109 ntBASIC13.69□□□□□ -0.22
Ebf3O08791 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf3O08791 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.69□□□□□ -0.22
Ebf3O08791 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf3O08791 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.69□□□□□ -0.22
Ebf3O08791 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.69□□□□□ -0.22
Ebf3O08791 Gm10146-201ENSMUST00000072739 309 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms