Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Usp35M0QWN7 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Gm8062-201ENSMUST00000139696 444 ntBASIC14.18□□□□□ -0.14
Usp35M0QWN7 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Usp35M0QWN7 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.18□□□□□ -0.14
Usp35M0QWN7 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.18□□□□□ -0.14
Usp35M0QWN7 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp35M0QWN7 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp35M0QWN7 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.18□□□□□ -0.14
Usp35M0QWN7 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp35M0QWN7 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp35M0QWN7 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.17□□□□□ -0.14
Usp35M0QWN7 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp35M0QWN7 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp35M0QWN7 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp35M0QWN7 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp35M0QWN7 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp35M0QWN7 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp35M0QWN7 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp35M0QWN7 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp35M0QWN7 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp35M0QWN7 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Usp35M0QWN7 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp35M0QWN7 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.17□□□□□ -0.14
Usp35M0QWN7 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Usp35M0QWN7 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.17□□□□□ -0.14
Usp35M0QWN7 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Usp35M0QWN7 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Usp35M0QWN7 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Usp35M0QWN7 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp35M0QWN7 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp35M0QWN7 Gm37424-201ENSMUST00000191727 561 ntBASIC14.17□□□□□ -0.14
Usp35M0QWN7 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp35M0QWN7 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.17□□□□□ -0.14
Usp35M0QWN7 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.17□□□□□ -0.14
Usp35M0QWN7 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp35M0QWN7 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.17□□□□□ -0.14
Usp35M0QWN7 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp35M0QWN7 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Usp35M0QWN7 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp35M0QWN7 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp35M0QWN7 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp35M0QWN7 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp35M0QWN7 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp35M0QWN7 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp35M0QWN7 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp35M0QWN7 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp35M0QWN7 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp35M0QWN7 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp35M0QWN7 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp35M0QWN7 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp35M0QWN7 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Usp35M0QWN7 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp35M0QWN7 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Usp35M0QWN7 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp35M0QWN7 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp35M0QWN7 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp35M0QWN7 Gm13392-201ENSMUST00000117708 150 ntBASIC14.16□□□□□ -0.14
Usp35M0QWN7 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Usp35M0QWN7 Gm24644-201ENSMUST00000157114 139 ntBASIC14.16□□□□□ -0.14
Usp35M0QWN7 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp35M0QWN7 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms