Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim55G3X8Y1 Gm7230-201ENSMUST00000173026 815 ntBASIC13.52□□□□□ -0.25
Trim55G3X8Y1 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.52□□□□□ -0.25
Trim55G3X8Y1 Gm45098-201ENSMUST00000207179 657 ntBASIC13.52□□□□□ -0.25
Trim55G3X8Y1 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.52□□□□□ -0.25
Trim55G3X8Y1 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim55G3X8Y1 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim55G3X8Y1 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim55G3X8Y1 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trim55G3X8Y1 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim55G3X8Y1 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.52□□□□□ -0.25
Trim55G3X8Y1 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim55G3X8Y1 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim55G3X8Y1 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim55G3X8Y1 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim55G3X8Y1 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim55G3X8Y1 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trim55G3X8Y1 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim55G3X8Y1 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Gm8000-201ENSMUST00000188378 592 ntBASIC13.51□□□□□ -0.25
Trim55G3X8Y1 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Gm5364-201ENSMUST00000216789 889 ntBASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.51□□□□□ -0.25
Trim55G3X8Y1 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim55G3X8Y1 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.5□□□□□ -0.25
Trim55G3X8Y1 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim55G3X8Y1 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim55G3X8Y1 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim55G3X8Y1 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.5□□□□□ -0.25
Trim55G3X8Y1 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim55G3X8Y1 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim55G3X8Y1 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trim55G3X8Y1 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim55G3X8Y1 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.5□□□□□ -0.25
Trim55G3X8Y1 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trim55G3X8Y1 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Trim55G3X8Y1 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim55G3X8Y1 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim55G3X8Y1 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim55G3X8Y1 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Trim55G3X8Y1 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim55G3X8Y1 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim55G3X8Y1 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim55G3X8Y1 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim55G3X8Y1 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim55G3X8Y1 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim55G3X8Y1 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Trim55G3X8Y1 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim55G3X8Y1 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim55G3X8Y1 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim55G3X8Y1 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC13.5□□□□□ -0.25
Trim55G3X8Y1 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trim55G3X8Y1 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim55G3X8Y1 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim55G3X8Y1 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
Trim55G3X8Y1 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim55G3X8Y1 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim55G3X8Y1 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim55G3X8Y1 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim55G3X8Y1 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim55G3X8Y1 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim55G3X8Y1 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trim55G3X8Y1 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms